RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 LAP3P28838 519 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 FMO3P31513 532 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 CDH11P55287 796 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 ARF1P84077 181 aaKnown RBP16.11■□□□□ 0.17
RFFL-211ENST00000584541 TEKQ02763 1124 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 ZNF474Q6S9Z5 364 aaPredicted RBP16.11■□□□□ 0.17
RFFL-211ENST00000584541 MEPCEQ7L2J0 689 aaKnown RBP16.11■□□□□ 0.17
RFFL-211ENST00000584541 CXorf67Q86X51 503 aaPredicted RBP16.11■□□□□ 0.17
RFFL-211ENST00000584541 BBS1Q8NFJ9 593 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 OR51L1Q8NGJ5 315 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 ZNF837Q96EG3 531 aaPredicted RBP16.11■□□□□ 0.17
RFFL-211ENST00000584541 ZNF582Q96NG8 517 aaPredicted RBP16.11■□□□□ 0.17
RFFL-211ENST00000584541 HDHD5Q9BXW7 423 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 KCNJ16Q9NPI9 418 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.11■□□□□ 0.17
RFFL-211ENST00000584541 CFAP46Q8IYW2 2715 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 J3QKU1 62 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 DENRO43583 198 aaKnown RBP16.1■□□□□ 0.17
RFFL-211ENST00000584541 ENTPD6O75354 484 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 FARS2O95363 451 aaKnown RBP16.1■□□□□ 0.17
RFFL-211ENST00000584541 ITGA5P08648 1049 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 SLC2A5P22732 501 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 CD79BP40259 229 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 MRPS34P82930 218 aaKnown RBP16.1■□□□□ 0.17
RFFL-211ENST00000584541 TMED1Q13445 227 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 SGCAQ16586 387 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 SFRP5Q5T4F7 317 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 OR7E24Q6IFN5 339 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 ANKRD16Q6P6B7 361 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 ZNF813Q6ZN06 617 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 BCDIN3DQ7Z5W3 292 aaKnown RBP16.1■□□□□ 0.17
RFFL-211ENST00000584541 ZNF433Q8N7K0 673 aaPredicted RBP16.1■□□□□ 0.17
RFFL-211ENST00000584541 C1orf162Q8NEQ5 155 aaPredicted RBP16.1■□□□□ 0.17
RFFL-211ENST00000584541 CNIH3Q8TBE1 160 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 KISS1RQ969F8 398 aaPredicted RBP16.1■□□□□ 0.17
RFFL-211ENST00000584541 TEAD3Q99594 435 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 NELFAQ9H3P2 528 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 TMEM38BQ9NVV0 291 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 WARS2Q9UGM6 360 aaKnown RBP16.1■□□□□ 0.17
RFFL-211ENST00000584541 UGT2A1Q9Y4X1 527 aa16.1■□□□□ 0.17
RFFL-211ENST00000584541 DIDO1Q9BTC0 2240 aaKnown RBP16.09■□□□□ 0.17
RFFL-211ENST00000584541 SH3D21A4FU49 640 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 LYZL6O75951 148 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 AGFG2O95081 481 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 CLDN14O95500 239 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 B4GALT1P15291 398 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 MSR1P21757 451 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 IL32P24001 234 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 GSTT1P30711 240 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 HTR1FP30939 366 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 HOXC12P31275 282 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 CDAP32320 146 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 FOXG1P55316 489 aaPredicted RBP16.09■□□□□ 0.17
RFFL-211ENST00000584541 HSF2Q03933 536 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 CDK5R2Q13319 367 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 MED21Q13503 144 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 NRN1LQ496H8 165 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 FOXL2NBQ6ZUU3 175 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 BHLHA15Q7RTS1 189 aaPredicted RBP16.09■□□□□ 0.17
RFFL-211ENST00000584541 OR10H5Q8NGA6 315 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 OR1K1Q8NGR3 316 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 ITLN2Q8WWU7 325 aaPredicted RBP16.09■□□□□ 0.17
RFFL-211ENST00000584541 FOXN4Q96NZ1 517 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 KCNN2Q9H2S1 579 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 GALNT8Q9NY28 637 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 AASSQ9UDR5 926 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 PCNX1Q96RV3 2341 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 HIVEP3Q5T1R4 2406 aa16.09■□□□□ 0.17
RFFL-211ENST00000584541 WBP4O75554 376 aaKnown RBP16.08■□□□□ 0.16
RFFL-211ENST00000584541 RAD51DO75771 328 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 SEC14L2O76054 403 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 OR8G3PP0DMU2 310 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 ZNF823P16415 610 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 PSMB1P20618 241 aaKnown RBP16.08■□□□□ 0.16
RFFL-211ENST00000584541 DBPQ10586 325 aaPredicted RBP16.08■□□□□ 0.16
RFFL-211ENST00000584541 FBXL19-AS1Q494R0 122 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 LINC01590Q5TEZ4 76 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 ZNF627Q7L945 461 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 SLC22A24Q8N4F4 322 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 STEAP2Q8NFT2 490 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 SLC26A10Q8NG04 563 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 FBLIM1Q8WUP2 373 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 APH1BQ8WW43 257 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 ZNRF4Q8WWF5 429 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 RNASE6Q93091 150 aaKnown RBP16.08■□□□□ 0.16
RFFL-211ENST00000584541 ZMYND19Q96E35 227 aaPredicted RBP16.08■□□□□ 0.16
RFFL-211ENST00000584541 USB1Q9BQ65 265 aaKnown RBP16.08■□□□□ 0.16
RFFL-211ENST00000584541 SIAEQ9HAT2 523 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 POLE4Q9NR33 117 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 POLR1DQ9Y2S0 133 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 RPL36Q9Y3U8 105 aaKnown RBP16.08■□□□□ 0.16
RFFL-211ENST00000584541 LRRC42Q9Y546 428 aa16.08■□□□□ 0.16
RFFL-211ENST00000584541 NKX2-6A6NCS4 301 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 CCDC182A6NF36 153 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 TVP23AA6NH52 213 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 C16orf97H3BN30 126 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 HRGP04196 525 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 GAAP10253 952 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 ATP6V1E1P36543 226 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 MTNR1AP48039 350 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms