RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ZNF726A6NNF4 738 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 SEC14L2O76054 403 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 CCNB2O95067 398 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 OR4A8P0C604 315 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 IL2RGP31785 369 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 SERPINF1P36955 418 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 BIDP55957 195 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 NAAAQ02083 359 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 CAMK2DQ13557 499 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 ZBED5Q49AG3 693 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 ALG10Q5BKT4 473 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 SLC35D2Q76EJ3 337 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 WDFY1Q8IWB7 410 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 ZCCHC24Q8N2G6 241 aaKnown RBP13.55□□□□□ -0.24
SKA2-209ENST00000583976 KCNS3Q9BQ31 491 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 KATNB1Q9BVA0 655 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 INIPQ9NRY2 104 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 HIF3AQ9Y2N7 669 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 AP4S1Q9Y587 144 aa13.55□□□□□ -0.24
SKA2-209ENST00000583976 A0A1W2PRG6 482 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 UNC119BA6NIH7 251 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 ANKRD65E5RJM6 399 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 NDUFS8O00217 210 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 SLC43A1O75387 559 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 E2F6O75461 281 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 GASTP01350 101 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 IGLV1-44P01699 117 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 TSPAN19P0C672 248 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 HOXB6P17509 224 aaKnown RBP13.54□□□□□ -0.24
SKA2-209ENST00000583976 IFNGR2P38484 337 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 SLC9A3P48764 834 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 CTXN1P60606 82 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 UBE2NP61088 152 aaKnown RBP13.54□□□□□ -0.24
SKA2-209ENST00000583976 ROR2Q01974 943 aaKnown RBP13.54□□□□□ -0.24
SKA2-209ENST00000583976 TOP3AQ13472 1001 aaPredicted RBP13.54□□□□□ -0.24
SKA2-209ENST00000583976 FHL1Q13642 323 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 MICAQ29983 383 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 PGBD2Q6P3X8 592 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 NHLRC1Q6VVB1 395 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 TMEM179BQ7Z7N9 219 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 SVOPLQ8N434 492 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 GNPDA2Q8TDQ7 276 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 BCL2L2Q92843 193 aaPredicted RBP13.54□□□□□ -0.24
SKA2-209ENST00000583976 OR2M2Q96R28 347 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 PLK3Q9H4B4 646 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 OBP2BQ9NPH6 170 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 CRNNQ9UBG3 495 aaPredicted RBP13.54□□□□□ -0.24
SKA2-209ENST00000583976 IL20RAQ9UHF4 553 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 RCE1Q9Y256 329 aa13.54□□□□□ -0.24
SKA2-209ENST00000583976 ARPC4-TTLL3A0A0A6YYG9 625 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 LOC390937A0A1W2PQ73 354 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 ERICH4A6NGS2 130 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 MCIDASD6RGH6 385 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 AKAP8O43823 692 aaKnown RBP13.53□□□□□ -0.24
SKA2-209ENST00000583976 ZNF432O94892 652 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 BCL10O95999 233 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 CRYAAP02489 173 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 RPL4P36578 427 aaKnown RBP13.53□□□□□ -0.24
SKA2-209ENST00000583976 IDH3GP51553 393 aaPredicted RBP13.53□□□□□ -0.24
SKA2-209ENST00000583976 ACTR3P61158 418 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 HGFACQ04756 655 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 EFNB3Q15768 340 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 C1orf94Q6P1W5 598 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 ABHD12BQ7Z5M8 362 aaPredicted RBP13.53□□□□□ -0.24
SKA2-209ENST00000583976 AQP11Q8NBQ7 271 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 PYDC1Q8WXC3 89 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 ZNF837Q96EG3 531 aaPredicted RBP13.53□□□□□ -0.24
SKA2-209ENST00000583976 BOD1Q96IK1 185 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 DENND2DQ9H6A0 471 aaPredicted RBP13.53□□□□□ -0.24
SKA2-209ENST00000583976 DNAJB9Q9UBS3 223 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 SIGLEC7Q9Y286 467 aa13.53□□□□□ -0.24
SKA2-209ENST00000583976 M0R3G1 203 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 HAX1O00165 279 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 PTP4A3O75365 173 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 IGFBP1P08833 259 aaPredicted RBP13.52□□□□□ -0.25
SKA2-209ENST00000583976 ZNF23P17027 643 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 ZNF26P17031 533 aaPredicted RBP13.52□□□□□ -0.25
SKA2-209ENST00000583976 PPOXP50336 477 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 ERVK-25P63136 954 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 NPRL3Q12980 569 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 CR1LQ2VPA4 569 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 PHYHD1Q5SRE7 291 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 ANKRD16Q6P6B7 361 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 AMIGO2Q86SJ2 522 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 HS3ST5Q8IZT8 346 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 TMEM123Q8N131 208 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 GPR137CQ8N3F9 429 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 LINC00471Q8N535 108 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 LRRC75AQ8NAA5 344 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 OR10G2Q8NGC3 310 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 OR6N1Q8NGY5 312 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 GIPC3Q8TF64 312 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 LRTOMTQ8WZ04 291 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 DUS3LQ96G46 650 aaKnown RBP13.52□□□□□ -0.25
SKA2-209ENST00000583976 C1orf159Q96HA4 380 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 NOX3Q9HBY0 568 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 ARMC1Q9NVT9 282 aa13.52□□□□□ -0.25
SKA2-209ENST00000583976 PDP1Q9P0J1 537 aaPredicted RBP13.52□□□□□ -0.25
SKA2-209ENST00000583976 ZNF346Q9UL40 294 aaKnown RBP13.52□□□□□ -0.25
SKA2-209ENST00000583976 B9A039 149 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms