RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 U3KQV3 271 aa16.76■□□□□ 0.27
SS18-208ENST00000577751 ARID1AO14497 2285 aa16.76■□□□□ 0.27
SS18-208ENST00000577751 PRSS37A4D1T9 235 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 H7C1C5 153 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 XKRYO14609 159 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 IMPA2O14732 288 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 ARPC3O15145 178 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 RAB36O95755 333 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 CST1P01037 141 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 GASTP01350 101 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 MMP7P09237 267 aaPredicted RBP16.75■□□□□ 0.27
SS18-208ENST00000577751 CDAP32320 146 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 PTH2RP49190 550 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 FABP6P51161 128 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 RPS6KA3P51812 740 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 LCN6P62502 163 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 HGFACQ04756 655 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 KRR1Q13601 381 aaKnown RBP16.75■□□□□ 0.27
SS18-208ENST00000577751 MICAQ29983 383 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 SLC36A2Q495M3 483 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 SHEQ5VZ18 495 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 C11orf71Q6IPW1 123 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 PRSS57Q6UWY2 283 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 ZNF620Q6ZNG0 422 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 SLC16A14Q7RTX9 510 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 SPATA24Q86W54 205 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 ZNF584Q8IVC4 421 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 PAPD5Q8NDF8 572 aaKnown RBP16.75■□□□□ 0.27
SS18-208ENST00000577751 OR4F15Q8NGB8 312 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 CBLN4Q9NTU7 201 aa16.75■□□□□ 0.27
SS18-208ENST00000577751 SERPINA5P05154 406 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 ZNF35P13682 527 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 SLC6A6P31641 620 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 RAB39AQ14964 217 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 FAM27BQ5VT28 67 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 ADCK1Q86TW2 530 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 TGIF2LYQ8IUE0 185 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 FBXL14Q8N1E6 418 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 LRRC18Q8N456 261 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 NUP37Q8NFH4 326 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 PERPQ96FX8 193 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 SAMD8Q96LT4 415 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 LRMDAQ9H2I8 198 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 CA10Q9NS85 328 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 IL20Q9NYY1 176 aa16.74■□□□□ 0.27
SS18-208ENST00000577751 VSX1Q9NZR4 365 aaPredicted RBP16.74■□□□□ 0.27
SS18-208ENST00000577751 CELSR1Q9NYQ6 3014 aa16.73■□□□□ 0.27
SS18-208ENST00000577751 USF3Q68DE3 2245 aa16.73■□□□□ 0.27
SS18-208ENST00000577751 SOCS2O14508 198 aa16.73■□□□□ 0.27
SS18-208ENST00000577751 PPP1R3DO95685 299 aa16.73■□□□□ 0.27
SS18-208ENST00000577751 CDKN2AP42771 156 aaKnown RBP16.73■□□□□ 0.27
SS18-208ENST00000577751 ETFDHQ16134 617 aa16.73■□□□□ 0.27
SS18-208ENST00000577751 TMEM53Q6P2H8 277 aa16.73■□□□□ 0.27
SS18-208ENST00000577751 PTCHD4Q6ZW05 846 aa16.73■□□□□ 0.27
SS18-208ENST00000577751 SLCO4A1Q96BD0 722 aa16.73■□□□□ 0.27
SS18-208ENST00000577751 ERMAPQ96PL5 475 aaPredicted RBP16.73■□□□□ 0.27
SS18-208ENST00000577751 DGCR6LQ9BY27 220 aa16.73■□□□□ 0.27
SS18-208ENST00000577751 ZNF469Q96JG9 3925 aaPredicted RBP16.72■□□□□ 0.27
SS18-208ENST00000577751 VPS13CQ709C8 3753 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 ITPR3Q14573 2671 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 IDH3BO43837 385 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 FKBP6O75344 327 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 CTLA4P16410 223 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 CDKN1AP38936 164 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 SGCAQ16586 387 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 MST1LQ2TV78 715 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 RPL13AP3Q6NVV1 102 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 RASSF6Q6ZTQ3 369 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 AQP11Q8NBQ7 271 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 WFDC11Q8NEX6 87 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 FBXO17Q96EF6 278 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 SNX18Q96RF0 628 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 IFT27Q9BW83 186 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 SYT4Q9H2B2 425 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 EGLN3Q9H6Z9 239 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 ZNF442Q9H7R0 627 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 YY1AP1Q9H869 796 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 RNF121Q9H920 327 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 CDH10Q9Y6N8 788 aa16.72■□□□□ 0.27
SS18-208ENST00000577751 ARRDC5A6NEK1 342 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 SCG5P05408 212 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 CST2P09228 141 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 NR4A1P22736 598 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 LAP3P28838 519 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 GUCA1AP43080 201 aaPredicted RBP16.71■□□□□ 0.27
SS18-208ENST00000577751 ADIPOQQ15848 244 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 SWI5Q1ZZU3 235 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 Q5PR19 223 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 ASRGL1Q7L266 308 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 TMEM179BQ7Z7N9 219 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 OR10G2Q8NGC3 310 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 GTPBP3Q969Y2 492 aaKnown RBP16.71■□□□□ 0.27
SS18-208ENST00000577751 TRMT61AQ96FX7 289 aaKnown RBP16.71■□□□□ 0.27
SS18-208ENST00000577751 TMUB1Q9BVT8 246 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 NUAK2Q9H093 628 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 KCNN2Q9H2S1 579 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 C1orf198Q9H425 327 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 POLE4Q9NR33 117 aa16.71■□□□□ 0.27
SS18-208ENST00000577751 HIVEP1P15822 2718 aa16.7■□□□□ 0.26
SS18-208ENST00000577751 A0A1W2PPL8 197 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms