RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 GIFP27352 417 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 ERP29P30040 261 aaKnown RBP9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 MAGEA2P43356 314 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 POLR2JP52435 117 aaKnown RBP9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 GPR50Q13585 617 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 MAPK11Q15759 364 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 NPTX1Q15818 432 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 ZSWIM7Q19AV6 140 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 ZIK1Q3SY52 487 aaPredicted RBP9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 TIMM50Q3ZCQ8 353 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 SPDYE7PQ495Y7 208 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 CCDC58Q4VC31 144 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 C6orf136Q5SQH8 315 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 EIF3MQ7L2H7 374 aaKnown RBP9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 SLC46A3Q7Z3Q1 461 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 CCDC190Q86UF4 302 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 ZBTB46Q86UZ6 589 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 TCTE3Q8IZS6 198 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 LINC01356Q8N9X3 169 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 RPL3LQ92901 407 aaKnown RBP9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 TUBGCP3Q96CW5 907 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 C1orf159Q96HA4 380 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 C3orf30Q96M34 536 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 VRK1Q99986 396 aaPredicted RBP9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 BPESC1Q9GZL8 116 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 ADAM19Q9H013 955 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 RACGAP1Q9H0H5 632 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 RAB1BQ9H0U4 201 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 SERHL2Q9H4I8 314 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 NIPAL2Q9H841 368 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 GMPR2Q9P2T1 348 aaKnown RBP9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 NUP50Q9UKX7 468 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 MOKQ9UQ07 419 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 SLC9A8Q9Y2E8 581 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 FIS1Q9Y3D6 152 aa9.33□□□□□ -0.92
CALCOCO2-228ENST00000576582 CENPVL1A0A0U1RR11 272 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 VSTM5A8MXK1 200 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 FAM220BPB1ANY3 271 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 FCMRO60667 390 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 EIF1BO60739 113 aaKnown RBP9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 STX11O75558 287 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 CYP7B1O75881 506 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 CST1P01037 141 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 CSTAP01040 98 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 MT-ND2P03891 347 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 ERCC1P07992 297 aaPredicted RBP9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 TACSTD2P09758 323 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 CD36P16671 472 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 PRPS1L1P21108 318 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 PSMB9P28065 219 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 MPGP29372 298 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 IFNA8P32881 189 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 SOX6P35712 828 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 COMPP49747 757 aaPredicted RBP9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 FOXG1P55316 489 aaPredicted RBP9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 VBP1P61758 197 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 NCS1P62166 190 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 HBA1P69905 142 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 H3F3AP84243 136 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 GALK2Q01415 458 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 SCGB2A2Q13296 93 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 EFNB3Q15768 340 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 ARHGAP11BQ3KRB8 267 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 ATP6AP1LQ52LC2 224 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 RABL3Q5HYI8 236 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 SPANXN2Q5MJ10 180 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 TMEM236Q5W0B7 351 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 KLHL24Q6TFL4 600 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 GDPD3Q7L5L3 318 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 TSPYL5Q86VY4 417 aaPredicted RBP9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 PARP16Q8N5Y8 322 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 LSMEM1Q8N8F7 131 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 OR5D16Q8NGK9 328 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 SLC47A1Q96FL8 570 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 ST6GAL2Q96JF0 529 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 RNF170Q96K19 258 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 WDFY2Q96P53 400 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 SEPHS2Q99611 448 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 KCNS3Q9BQ31 491 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 NAA11Q9BSU3 229 aaPredicted RBP9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 NUAK2Q9H093 628 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 PLK3Q9H4B4 646 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 POLE3Q9NRF9 147 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 SLC7A10Q9NS82 523 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 CA10Q9NS85 328 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 ACOXLQ9NUZ1 547 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 GIMAP2Q9UG22 337 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 CHRNA9Q9UGM1 479 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 KLHL21Q9UJP4 597 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 USP22Q9UPT9 525 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 PCDHB14Q9Y5E9 798 aa9.32□□□□□ -0.92
CALCOCO2-228ENST00000576582 BET1O15155 118 aa9.31□□□□□ -0.92
CALCOCO2-228ENST00000576582 AIREO43918 545 aa9.31□□□□□ -0.92
CALCOCO2-228ENST00000576582 MTRF1O75570 445 aaKnown RBP9.31□□□□□ -0.92
CALCOCO2-228ENST00000576582 CRYAAP02489 173 aa9.31□□□□□ -0.92
CALCOCO2-228ENST00000576582 IL7P13232 177 aa9.31□□□□□ -0.92
CALCOCO2-228ENST00000576582 NCK1P16333 377 aa9.31□□□□□ -0.92
CALCOCO2-228ENST00000576582 SLC15A1P46059 708 aa9.31□□□□□ -0.92
CALCOCO2-228ENST00000576582 PPOXP50336 477 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms