RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 GABARAPL3Q9BY60 117 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 OBP2BQ9NPH6 170 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 CRIM1Q9NZV1 1036 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 B9D1Q9UPM9 204 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 COA3Q9Y2R0 106 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 FKBP7Q9Y680 259 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 ABCA4P78363 2273 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 CADP27708 2225 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 RTTNQ86VV8 2226 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 ZAR1LA6NP61 321 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 PRR23D1E9PI22 279 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 CASQ2O14958 399 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 SURF4O15260 269 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 HLA-DQA2P01906 255 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 PRR23D2P0DMB1 279 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 LAP3P28838 519 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 EPHA2P29317 976 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 CDAP32320 146 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 POLR2IP36954 125 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 TUBA1BP68363 451 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 TUBA4AP68366 448 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 MRPS34P82930 218 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 RIPK1Q13546 671 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 TUBA1AQ71U36 451 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC16A14Q7RTX9 510 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 LRRC18Q8N456 261 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 PACRGLQ8N7B6 248 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 ZNF555Q8NEP9 628 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 PROKR2Q8NFJ6 384 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 OR9Q1Q8NGQ5 310 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 FOXN4Q96NZ1 517 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 TOR3AQ9H497 397 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 RNF121Q9H920 327 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 SIAEQ9HAT2 523 aa12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 SMPD3Q9NY59 655 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-218ENST00000574964 PTPN13Q12923 2485 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 FAM171A2A8MVW0 826 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 SNAP29O95721 258 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 CD79AP11912 226 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 MSR1P21757 451 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 PAX7P23759 505 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 PYCR1P32322 319 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 CDC42P60953 191 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 GLO1Q04760 184 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 SLC36A2Q495M3 483 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 NRN1LQ496H8 165 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 ZNF362Q5T0B9 420 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 C1QTNF12Q5T7M4 302 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 OGFRL1Q5TC84 451 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 FBXW10Q5XX13 1052 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 PLBD1Q6P4A8 553 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 ZNF627Q7L945 461 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 GLB1L2Q8IW92 636 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 OR6V1Q8N148 313 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 TCEANCQ8N8B7 351 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 WDR31Q8NA23 367 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 OR10H5Q8NGA6 315 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 HTRA1Q92743 480 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 RDH12Q96NR8 316 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 SH3GL3Q99963 347 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 C1QTNF6Q9BXI9 259 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 GRIP2Q9C0E4 1043 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 RACGAP1Q9H0H5 632 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 OR51V1Q9H2C8 321 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 VCX3BQ9H321 246 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 NELFAQ9H3P2 528 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 CCNB1IP1Q9NPC3 277 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 IMPAD1Q9NX62 359 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 H2AFY2Q9P0M6 372 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 KCNN3Q9UGI6 736 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 POLR1DQ9Y2S0 133 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 UGT2A1Q9Y4X1 527 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 GMPPBQ9Y5P6 360 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 SLC25A15Q9Y619 301 aa12.7□□□□□ -0.38
NPLOC4-218ENST00000574964 CACNA1DQ01668 2161 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 ARPC4-TTLL3A0A0A6YYG9 625 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 DCTN6O00399 190 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 TLX2O43763 284 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 UBL3O95164 117 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 ATP6V1G2O95670 118 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 HLA-HP01893 362 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 THBDP07204 575 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 ZNF83P51522 516 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 SLC25A1P53007 311 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 RPS7P62081 194 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 PIGFQ07326 219 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 KLHL12Q53G59 568 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 C12orf73Q69YU5 71 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 TMEM53Q6P2H8 277 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 C22orf34Q6ZV56 151 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 CXXC5Q7LFL8 322 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 DPPA2Q7Z7J5 298 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 CPOQ8IVL8 374 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 SKA3Q8IX90 412 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 OR51L1Q8NGJ5 315 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 OR6K6Q8NGW6 343 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 FAM81AQ8TBF8 368 aa12.69□□□□□ -0.38
NPLOC4-218ENST00000574964 BOD1Q96IK1 185 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms