RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 RAD51DO75771 328 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 CLIC3O95833 236 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 ITGA5P08648 1049 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 PRR23D2P0DMB1 279 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 PAICSP22234 425 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 CRABP1P29762 137 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 CAPGP40121 348 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 GUCA1AP43080 201 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 ZNF84P51523 738 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 ARF1P84077 181 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 SNTB1Q13884 538 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 KEAP1Q14145 624 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 TSC22D1Q15714 1073 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 STK11Q15831 433 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 ETFDHQ16134 617 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 PLBD1Q6P4A8 553 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 KLHL24Q6TFL4 600 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 OR6V1Q8N148 313 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 OR9Q1Q8NGQ5 310 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 TMEM163Q8TC26 289 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 TRUB1Q8WWH5 349 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 HSD17B8Q92506 261 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 TFAP2CQ92754 450 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 S100PBPQ96BU1 408 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 NMD3Q96D46 503 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 MUCL1Q96DR8 90 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 MUS81Q96NY9 551 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 OR51V1Q9H2C8 321 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 IMPAD1Q9NX62 359 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 ZNF226Q9NYT6 803 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 H2AFY2Q9P0M6 372 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 KCNN3Q9UGI6 736 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 B9D1Q9UPM9 204 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 COA3Q9Y2R0 106 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 NOTCH2Q04721 2471 aa11.33□□□□□ -0.6
NPLOC4-214ENST00000573876 ROS1P08922 2347 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 ABCA12Q86UK0 2595 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 NBPF19A0A087WUL8 3843 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 ZNF99A8MXY4 864 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 H0YAE9 185 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 DCTN6O00399 190 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 KHDRBS3O75525 346 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 GYPBP06028 91 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 CLUP10909 449 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 EPXP11678 715 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 HOXB1P14653 301 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 CTLA4P16410 223 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 COL8A1P27658 744 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 CCKARP32238 428 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 UBE2NP61088 152 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 GABRA6Q16445 453 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 TIMM23BQ5SRD1 257 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 C1QTNF12Q5T7M4 302 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 ANKRD16Q6P6B7 361 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 CXXC5Q7LFL8 322 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 BCDIN3DQ7Z5W3 292 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 DEPDC4Q8N2C3 294 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 C17orf78Q8N4C9 275 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 ACBD4Q8NC06 268 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 OR51L1Q8NGJ5 315 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 OR8J1Q8NGP2 316 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 OR1K1Q8NGR3 316 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 ZNRF4Q8WWF5 429 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 ZC3HAV1LQ96H79 300 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 FOXN4Q96NZ1 517 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 WFIKKN1Q96NZ8 548 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 SNX18Q96RF0 628 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 PITX2Q99697 317 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 APOL4Q9BPW4 351 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 HCAR1Q9BXC0 346 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 SEC61A2Q9H9S3 476 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 NGBQ9NPG2 151 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 HINT3Q9NQE9 182 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 RASSF1Q9NS23 344 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 CRIM1Q9NZV1 1036 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 AASSQ9UDR5 926 aa11.32□□□□□ -0.6
NPLOC4-214ENST00000573876 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 WNT11O96014 354 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 GNAO1P09471 354 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 CDAP32320 146 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 PYCR1P32322 319 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 HSPA13P48723 471 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 ZNF133P52736 654 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 SLC25A1P53007 311 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 IL5RAQ01344 420 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 SGCAQ16586 387 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 KLHL12Q53G59 568 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 C10orf128Q5T292 105 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 ZNF691Q5VV52 312 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 CRYBG3Q68DQ2 2970 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 ALKBH2Q6NS38 261 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 DNM1P34Q6PK57 102 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 ZNF813Q6ZN06 617 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 ZBTB46Q86UZ6 589 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 WFDC8Q8IUA0 241 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 ENTHD1Q8IYW4 607 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 PROKR2Q8NFJ6 384 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 BBS1Q8NFJ9 593 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 OR2T4Q8NH00 348 aa11.31□□□□□ -0.6
NPLOC4-214ENST00000573876 RHOXF1Q8NHV9 184 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms