RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 HPXP02790 462 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 COX4I1P13073 169 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 CCL2P13500 99 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 TCN1P20061 433 aaPredicted RBP17.03■□□□□ 0.32
CLN6-206ENST00000565471 IL2RGP31785 369 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 MDH1P40925 334 aaKnown RBP17.03■□□□□ 0.32
CLN6-206ENST00000565471 KLF3P57682 345 aaPredicted RBP17.03■□□□□ 0.32
CLN6-206ENST00000565471 RPL27P61353 136 aaKnown RBP17.03■□□□□ 0.32
CLN6-206ENST00000565471 FMODQ06828 376 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 CD47Q08722 323 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 TRAM2Q15035 370 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 TRIP10Q15642 601 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 FAM205BPQ63HN1 556 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 SLC25A47Q6Q0C1 308 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 VTCN1Q7Z7D3 282 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 LINC01356Q8N9X3 169 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 SYNPRQ8TBG9 265 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 GEMIN6Q8WXD5 167 aaKnown RBP17.03■□□□□ 0.32
CLN6-206ENST00000565471 HOPXQ9BPY8 73 aaPredicted RBP17.03■□□□□ 0.32
CLN6-206ENST00000565471 FNDC11Q9BVV2 318 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 MED4Q9NPJ6 270 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 SLCO1C1Q9NYB5 712 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 GMPR2Q9P2T1 348 aaKnown RBP17.03■□□□□ 0.32
CLN6-206ENST00000565471 MXRA5Q9NR99 2828 aa17.03■□□□□ 0.32
CLN6-206ENST00000565471 IGKV1D-43A0A0B4J1Z2 117 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 CXCR6O00574 342 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 LCKP06239 509 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 SAGP10523 405 aaPredicted RBP17.02■□□□□ 0.32
CLN6-206ENST00000565471 NAT2P11245 290 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 MAKP20794 623 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 CDAP32320 146 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 APLNRP35414 380 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 SLC7A2P52569 658 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 CDH15P55291 814 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 UCP2P55851 309 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 HSF2Q03933 536 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 PRKCDQ05655 676 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 TOP3AQ13472 1001 aaPredicted RBP17.02■□□□□ 0.32
CLN6-206ENST00000565471 NKPD1Q17RQ9 610 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 IFI44LQ53G44 452 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 PABPC1L2AQ5JQF8 200 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 THEM4Q5T1C6 240 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 C8orf82Q6P1X6 216 aaPredicted RBP17.02■□□□□ 0.32
CLN6-206ENST00000565471 HACD2Q6Y1H2 254 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 CBLL1Q75N03 491 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 PHC2Q8IXK0 858 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 NRMQ8IXM6 262 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 RNF113BQ8IZP6 322 aaKnown RBP17.02■□□□□ 0.32
CLN6-206ENST00000565471 LRRC75AQ8NAA5 344 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 CPEB3Q8NE35 698 aaKnown RBP17.02■□□□□ 0.32
CLN6-206ENST00000565471 C11orf40Q8WZ69 217 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 RBP7Q96R05 134 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 EFCAB1Q9HAE3 211 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 CCNB1IP1Q9NPC3 277 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 TAAR3PQ9P1P4 343 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 SNX13Q9Y5W8 968 aa17.02■□□□□ 0.32
CLN6-206ENST00000565471 NME4O00746 187 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 NDUFAB1O14561 156 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 FFAR1O14842 300 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 NCR1O76036 304 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 ZNF682O95780 498 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 CLPTM1O96005 669 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 ZNF32P17041 273 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 FUT4P22083 530 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 COL8A2P25067 703 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 GPR6P46095 362 aaPredicted RBP17.01■□□□□ 0.31
CLN6-206ENST00000565471 YAP1P46937 504 aaKnown RBP17.01■□□□□ 0.31
CLN6-206ENST00000565471 SLC9A3P48764 834 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 TMEM33P57088 247 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 CTXN1P60606 82 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 ERVS71-1P61550 626 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 CR1LQ2VPA4 569 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 PCGF3Q3KNV8 242 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 FAM27BQ5VT28 67 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 IL17RELQ6ZVW7 336 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 SNX33Q8WV41 574 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 ACOT11Q8WXI4 607 aaPredicted RBP17.01■□□□□ 0.31
CLN6-206ENST00000565471 NSMAFQ92636 917 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 OR51B6Q9H340 312 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 HINT3Q9NQE9 182 aaKnown RBP17.01■□□□□ 0.31
CLN6-206ENST00000565471 RHCGQ9UBD6 479 aa17.01■□□□□ 0.31
CLN6-206ENST00000565471 A6NIZ1 184 aa17■□□□□ 0.31
CLN6-206ENST00000565471 C17orf100A8MU93 164 aa17■□□□□ 0.31
CLN6-206ENST00000565471 J3KTA2 159 aa17■□□□□ 0.31
CLN6-206ENST00000565471 GSTA4O15217 222 aa17■□□□□ 0.31
CLN6-206ENST00000565471 PRSS23O95084 383 aa17■□□□□ 0.31
CLN6-206ENST00000565471 STOMP27105 288 aa17■□□□□ 0.31
CLN6-206ENST00000565471 GSK3BP49841 420 aa17■□□□□ 0.31
CLN6-206ENST00000565471 RAP1BP61224 184 aa17■□□□□ 0.31
CLN6-206ENST00000565471 RAP1AP62834 184 aa17■□□□□ 0.31
CLN6-206ENST00000565471 FHL1Q13642 323 aa17■□□□□ 0.31
CLN6-206ENST00000565471 SGCAQ16586 387 aa17■□□□□ 0.31
CLN6-206ENST00000565471 MOGQ16653 247 aa17■□□□□ 0.31
CLN6-206ENST00000565471 FOXL2NBQ6ZUU3 175 aa17■□□□□ 0.31
CLN6-206ENST00000565471 OAFQ86UD1 273 aa17■□□□□ 0.31
CLN6-206ENST00000565471 FAM156AQ8NDB6 213 aa17■□□□□ 0.31
CLN6-206ENST00000565471 OR51A7Q8NH64 312 aa17■□□□□ 0.31
CLN6-206ENST00000565471 YIPF5Q969M3 257 aa17■□□□□ 0.31
CLN6-206ENST00000565471 POM121L2Q96KW2 1035 aa17■□□□□ 0.31
CLN6-206ENST00000565471 TSPAN32Q96QS1 320 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms