RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 MS4A5Q9H3V2 200 aa8.6□□□□□ -1.03
CMTM3-209ENST00000565003 SIAEQ9HAT2 523 aa8.6□□□□□ -1.03
CMTM3-209ENST00000565003 SMURF2Q9HAU4 748 aa8.6□□□□□ -1.03
CMTM3-209ENST00000565003 CDH20Q9HBT6 801 aa8.6□□□□□ -1.03
CMTM3-209ENST00000565003 MED4Q9NPJ6 270 aa8.6□□□□□ -1.03
CMTM3-209ENST00000565003 STX18Q9P2W9 335 aaKnown RBP8.6□□□□□ -1.03
CMTM3-209ENST00000565003 LPAR3Q9UBY5 353 aa8.6□□□□□ -1.03
CMTM3-209ENST00000565003 DUSP13Q9UII6 198 aa8.6□□□□□ -1.03
CMTM3-209ENST00000565003 KCNS2Q9ULS6 477 aa8.6□□□□□ -1.03
CMTM3-209ENST00000565003 AP3M1Q9Y2T2 418 aa8.6□□□□□ -1.03
CMTM3-209ENST00000565003 A0A087WUU8 490 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 IQCMA0A1B0GVH7 501 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 GSTA4O15217 222 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 PHF1O43189 567 aaPredicted RBP8.59□□□□□ -1.03
CMTM3-209ENST00000565003 MGRN1O60291 552 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 CCDC22O60826 627 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 PRSS23O95084 383 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 CLPTM1O96005 669 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 SERPINA1P01009 418 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 SAGP10523 405 aaPredicted RBP8.59□□□□□ -1.03
CMTM3-209ENST00000565003 NCK1P16333 377 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 ZNF32P17041 273 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 APEX1P27695 318 aaKnown RBP8.59□□□□□ -1.03
CMTM3-209ENST00000565003 IFNA8P32881 189 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 GSK3BP49841 420 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 NUDT2P50583 147 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 CHN2P52757 468 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 CTXN1P60606 82 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 RPL27P61353 136 aaKnown RBP8.59□□□□□ -1.03
CMTM3-209ENST00000565003 HSF2Q03933 536 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 PRKCDQ05655 676 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 TRAM2Q15035 370 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 TAF11Q15544 211 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 IFI44LQ53G44 452 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 PABPC1L2AQ5JQF8 200 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 SLC25A47Q6Q0C1 308 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 TBPL2Q6SJ96 375 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 CBLL1Q75N03 491 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 TSEN54Q7Z6J9 526 aaKnown RBP8.59□□□□□ -1.03
CMTM3-209ENST00000565003 PHC2Q8IXK0 858 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 OR51A7Q8NH64 312 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 SPATA3Q8NHX4 192 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 ZNF519Q8TB69 540 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 YIPF5Q969M3 257 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 FNDC11Q9BVV2 318 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 C1orf198Q9H425 327 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 CCNB1IP1Q9NPC3 277 aa8.59□□□□□ -1.03
CMTM3-209ENST00000565003 ZNF346Q9UL40 294 aaKnown RBP8.59□□□□□ -1.03
CMTM3-209ENST00000565003 IGLV3-9A0A075B6K5 115 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 SLC22A23A1A5C7 686 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 RNF212BA8MTL3 300 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 EFCAB9A8MZ26 197 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 H7C1C5 153 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 CDC42EP2O14613 210 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 WNT9BO14905 357 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 PTHP01270 115 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 LCKP06239 509 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ZNF250P15622 560 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ZNF26P17031 533 aaPredicted RBP8.58□□□□□ -1.04
CMTM3-209ENST00000565003 SRD5A1P18405 259 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 COL8A2P25067 703 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 STOMP27105 288 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 APLNRP35414 380 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 WNT5AP41221 380 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 MAGEB1P43366 347 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 GPR4P46093 362 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 UCP2P55851 309 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 KLF3P57682 345 aaPredicted RBP8.58□□□□□ -1.04
CMTM3-209ENST00000565003 LCN6P62502 163 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ERVK-25P63136 954 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 PSG4Q00888 419 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 GLO1Q04760 184 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 PLP2Q04941 152 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 CCNIQ14094 377 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 SGCAQ16586 387 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 NKPD1Q17RQ9 610 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 CR1LQ2VPA4 569 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 FAM27BQ5VT28 67 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 HACD2Q6Y1H2 254 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 FKBP9P1Q75LS8 142 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 OAFQ86UD1 273 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ZNF101Q8IZC7 436 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ICA1LQ8NDH6 482 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 AKR7LQ8NHP1 331 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ACOT11Q8WXI4 607 aaPredicted RBP8.58□□□□□ -1.04
CMTM3-209ENST00000565003 GTF3AQ92664 365 aaKnown RBP8.58□□□□□ -1.04
CMTM3-209ENST00000565003 RDH5Q92781 318 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 HPS1Q92902 700 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 FAM162AQ96A26 154 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 HOPXQ9BPY8 73 aaPredicted RBP8.58□□□□□ -1.04
CMTM3-209ENST00000565003 KCTD14Q9BQ13 255 aaPredicted RBP8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ELAC2Q9BQ52 826 aaKnown RBP8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ALG12Q9BV10 488 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 BCL2L14Q9BZR8 327 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 MYLK2Q9H1R3 596 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 EFCAB1Q9HAE3 211 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ZNF275Q9NSD4 429 aaPredicted RBP8.58□□□□□ -1.04
CMTM3-209ENST00000565003 TAAR3PQ9P1P4 343 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ABCD2Q9UBJ2 740 aa8.58□□□□□ -1.04
CMTM3-209ENST00000565003 ADAM18Q9Y3Q7 739 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms