RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 RAP1AP62834 184 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 MRPS34P82930 218 aaKnown RBP5.39□□□□□ -1.55
CNOT1-204ENST00000563130 MYBPC1Q00872 1141 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 FMODQ06828 376 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 TOP3AQ13472 1001 aaPredicted RBP5.39□□□□□ -1.55
CNOT1-204ENST00000563130 CCNIQ14094 377 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 THEM4Q5T1C6 240 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 C1orf146Q5VVC0 180 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 FBXW10Q5XX13 1052 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 GPR139Q6DWJ6 353 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 KLHL17Q6TDP4 642 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 KLHL24Q6TFL4 600 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 TMEM108Q6UXF1 575 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 PAMR1Q6UXH9 720 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 CD300LDQ6UXZ3 194 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF813Q6ZN06 617 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 RASSF6Q6ZTQ3 369 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 FOXL2NBQ6ZUU3 175 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 YTHDF3Q7Z739 585 aaKnown RBP5.39□□□□□ -1.55
CNOT1-204ENST00000563130 SKA3Q8IX90 412 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 WFDC12Q8WWY7 111 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 RADILQ96JH8 1075 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 YY1AP1Q9H869 796 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 ARMC1Q9NVT9 282 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 GRHPRQ9UBQ7 328 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 DNAJB9Q9UBS3 223 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 ST6GALNAC2Q9UJ37 374 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 POFUT2Q9Y2G5 429 aa5.39□□□□□ -1.55
CNOT1-204ENST00000563130 IGHV1-18A0A0C4DH31 117 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 TEX13CA0A0J9YWL9 993 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 SLC22A23A1A5C7 686 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 PRSS37A4D1T9 235 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 ABCD4O14678 606 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 IMPA2O14732 288 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 ARHGEF9O43307 516 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 HLA-HP01893 362 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 OR8G3PP0DMU2 310 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 ARR3P36575 388 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF83P51522 516 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 RPS6KA3P51812 740 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 ACTR3P61158 418 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 TUBA1BP68363 451 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 TUBA4AP68366 448 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 C21orf62-AS1Q17RA5 79 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 RPL13AP3Q6NVV1 102 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 TUBA1AQ71U36 451 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 CDH24Q86UP0 819 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 THNSL2Q86YJ6 484 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 SLC22A24Q8N4F4 322 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF611Q8N823 705 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 AQP11Q8NBQ7 271 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 KBTBD8Q8NFY9 601 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 OR10G2Q8NGC3 310 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 FGFBP3Q8TAT2 258 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 FANK1Q8TC84 345 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 CHAC2Q8WUX2 184 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 NABP1Q96AH0 204 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF570Q96NI8 536 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 SLC38A2Q96QD8 506 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 RBP7Q96R05 134 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 SNX18Q96RF0 628 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 FEVQ99581 238 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 NIPSNAP1Q9BPW8 284 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 C1QTNF6Q9BXI9 259 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 PLA2G12AQ9BZM1 189 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 NDEL1Q9GZM8 345 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 DENND2DQ9H6A0 471 aaPredicted RBP5.38□□□□□ -1.55
CNOT1-204ENST00000563130 NOX3Q9HBY0 568 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 VSX1Q9NZR4 365 aaPredicted RBP5.38□□□□□ -1.55
CNOT1-204ENST00000563130 MGAT4BQ9UQ53 548 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 IER3IP1Q9Y5U9 82 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 CDH10Q9Y6N8 788 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 TEX15Q9BXT5 2789 aa5.38□□□□□ -1.55
CNOT1-204ENST00000563130 F8W735 103 aaPredicted RBP5.37□□□□□ -1.55
CNOT1-204ENST00000563130 M0R1B8 84 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 BHLHE40O14503 412 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 HS3ST1O14792 307 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 IDH3BO43837 385 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 ATE1O95260 518 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 CECR9P0C854 216 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 DANCRP0C864 163 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 GSTM3P21266 225 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 SLC6A6P31641 620 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 CDKN2AP42771 156 aaKnown RBP5.37□□□□□ -1.55
CNOT1-204ENST00000563130 SPOCK1Q08629 439 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 CD47Q08722 323 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 COX10Q12887 443 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 KRR1Q13601 381 aaKnown RBP5.37□□□□□ -1.55
CNOT1-204ENST00000563130 GSG1Q2KHT4 349 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF672Q499Z4 452 aaPredicted RBP5.37□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF362Q5T0B9 420 aaPredicted RBP5.37□□□□□ -1.55
CNOT1-204ENST00000563130 FAM27BQ5VT28 67 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 PTCHD4Q6ZW05 846 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 ADCK1Q86TW2 530 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 MDP1Q86V88 176 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 MYPOPQ86VE0 399 aaPredicted RBP5.37□□□□□ -1.55
CNOT1-204ENST00000563130 HS3ST5Q8IZT8 346 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 OR8D4Q8NGM9 314 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 GIPC3Q8TF64 312 aa5.37□□□□□ -1.55
CNOT1-204ENST00000563130 AKAP1Q92667 903 aaKnown RBP eCLIP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms