RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 LURAP1Q96LR2 239 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 WACQ9BTA9 647 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 IFT27Q9BW83 186 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 RBM4Q9BWF3 364 aaKnown RBP11.69□□□□□ -0.54
CDH1-204ENST00000562118 SYT4Q9H2B2 425 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 ESRP2Q9H6T0 727 aaKnown RBP11.69□□□□□ -0.54
CDH1-204ENST00000562118 OAZ3Q9UMX2 235 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 NOTCH2Q04721 2471 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 HEATR1Q9H583 2144 aaKnown RBP11.69□□□□□ -0.54
CDH1-204ENST00000562118 NAV2Q8IVL1 2488 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 A0A1W2PR80 420 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 OR6C68A6NDL8 312 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 H7C1C5 153 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 SEC14L2O76054 403 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 UBL3O95164 117 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 SOX14O95416 240 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 ARR3P36575 388 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 SLC25A1P53007 311 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 LCN6P62502 163 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 ENDOGQ14249 297 aaKnown RBP11.68□□□□□ -0.54
CDH1-204ENST00000562118 CLEC12AQ5QGZ9 265 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 TMEM108Q6UXF1 575 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 SYT9Q86SS6 491 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 MYPOPQ86VE0 399 aaPredicted RBP11.68□□□□□ -0.54
CDH1-204ENST00000562118 ZNF584Q8IVC4 421 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 FGFBP3Q8TAT2 258 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 PIK3IP1Q96FE7 263 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 RADILQ96JH8 1075 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 SLC38A2Q96QD8 506 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 TSSK6Q9BXA6 273 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 GABARAPL3Q9BY60 117 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 ZNF556Q9HAH1 456 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 POLE4Q9NR33 117 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 PAPOLBQ9NRJ5 636 aaKnown RBP11.68□□□□□ -0.54
CDH1-204ENST00000562118 CMC2Q9NRP2 79 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 TBC1D23Q9NUY8 699 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 USE1Q9NZ43 259 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 FKBP7Q9Y680 259 aa11.68□□□□□ -0.54
CDH1-204ENST00000562118 HLA-HP01893 362 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 SCG5P05408 212 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 CST2P09228 141 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 CECR9P0C854 216 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 ZNF23P17027 643 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 CDH2P19022 906 aaPredicted RBP11.67□□□□□ -0.54
CDH1-204ENST00000562118 CRABP1P29762 137 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 GIPRP48546 466 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 UBE2NP61088 152 aaKnown RBP11.67□□□□□ -0.54
CDH1-204ENST00000562118 LSM6P62312 80 aaKnown RBP11.67□□□□□ -0.54
CDH1-204ENST00000562118 ESRRGP62508 458 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 EFNB1P98172 346 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDH1-204ENST00000562118 ETFDHQ16134 617 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 GSG1Q2KHT4 349 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 ACSM5Q6NUN0 579 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 SLC27A4Q6P1M0 643 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 LEG1Q6P5S2 330 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 ZNF704Q6ZNC4 412 aaPredicted RBP11.67□□□□□ -0.54
CDH1-204ENST00000562118 MDP1Q86V88 176 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 GLB1L2Q8IW92 636 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 OR6V1Q8N148 313 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 PQLC1Q8N2U9 271 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 ATG16L2Q8NAA4 619 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 OR4K13Q8NH42 304 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 TEX47Q8TBZ9 253 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 NANOS1Q8WY41 292 aaKnown RBP11.67□□□□□ -0.54
CDH1-204ENST00000562118 NMNAT3Q96T66 252 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 NUAK2Q9H093 628 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 KLHL21Q9UJP4 597 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 B9D1Q9UPM9 204 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 RNF115Q9Y4L5 304 aa11.67□□□□□ -0.54
CDH1-204ENST00000562118 AKAP6Q13023 2319 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 ZAR1LA6NP61 321 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 SURF4O15260 269 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 SLC16A7O60669 478 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 ICMTO60725 284 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 KHDRBS3O75525 346 aaKnown RBP11.66□□□□□ -0.54
CDH1-204ENST00000562118 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
CDH1-204ENST00000562118 PLAUP00749 431 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 ALPLP05186 524 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 CD3EP07766 207 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 ZNF35P13682 527 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 MSR1P21757 451 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 LAP3P28838 519 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 CDAP32320 146 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 ZNF83P51522 516 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 CRISP1P54107 249 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 TUBA1BP68363 451 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 TUBA4AP68366 448 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 HIST1H3AP68431 136 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 NAAAQ02083 359 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 SPOCK1Q08629 439 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 PCK2Q16822 640 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 ZNF672Q499Z4 452 aaPredicted RBP11.66□□□□□ -0.54
CDH1-204ENST00000562118 HIST2H3PS2Q5TEC6 136 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 PAMR1Q6UXH9 720 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 HIST2H3AQ71DI3 136 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 TUBA1AQ71U36 451 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 JAZF1Q86VZ6 243 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 SLC37A3Q8NCC5 494 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms