RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 OR10R2Q8NGX6 335 aa2.26□□□□□ -2.05
PSMA4-221ENST00000560842 ZNF461Q8TAF7 563 aa2.26□□□□□ -2.05
PSMA4-221ENST00000560842 RSPH1Q8WYR4 309 aa2.26□□□□□ -2.05
PSMA4-221ENST00000560842 STMN2Q93045 179 aa2.26□□□□□ -2.05
PSMA4-221ENST00000560842 PIK3IP1Q96FE7 263 aa2.26□□□□□ -2.05
PSMA4-221ENST00000560842 ETNK2Q9NVF9 386 aa2.26□□□□□ -2.05
PSMA4-221ENST00000560842 ISY1Q9ULR0 285 aaKnown RBP2.26□□□□□ -2.05
PSMA4-221ENST00000560842 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 FAM240BA0A1B0GVZ2 78 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 FOXE1O00358 373 aaPredicted RBP2.25□□□□□ -2.05
PSMA4-221ENST00000560842 CXCL11O14625 94 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 MRPS12O15235 138 aaKnown RBP2.25□□□□□ -2.05
PSMA4-221ENST00000560842 MPZL1O95297 269 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 IGKV1-17P01599 117 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 DCNP07585 359 aaKnown RBP2.25□□□□□ -2.05
PSMA4-221ENST00000560842 CT62P0C5K7 136 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 ZNF14P17017 642 aaPredicted RBP2.25□□□□□ -2.05
PSMA4-221ENST00000560842 NPY1RP25929 384 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 CDKN1BP46527 198 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 RPL23AP62750 156 aaKnown RBP2.25□□□□□ -2.05
PSMA4-221ENST00000560842 ARG2P78540 354 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 GINS1Q14691 196 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 PRSS8Q16651 343 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 IMMTQ16891 758 aaKnown RBP2.25□□□□□ -2.05
PSMA4-221ENST00000560842 CTSL3PQ5NE16 218 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 KPRPQ5T749 579 aaPredicted RBP2.25□□□□□ -2.05
PSMA4-221ENST00000560842 ANKRD22Q5VYY1 191 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 NEGR1Q7Z3B1 354 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 EIF1ADQ8N9N8 165 aaKnown RBP2.25□□□□□ -2.05
PSMA4-221ENST00000560842 ABHD3Q8WU67 409 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 PIBF1Q8WXW3 757 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 SEH1LQ96EE3 360 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 NT5C3AQ9H0P0 336 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 LRRC40Q9H9A6 602 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 MRPS18BQ9Y676 258 aaKnown RBP2.25□□□□□ -2.05
PSMA4-221ENST00000560842 TNS2Q63HR2 1409 aa2.25□□□□□ -2.05
PSMA4-221ENST00000560842 A0A0U1RQV1 116 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 TMEM223A0PJW6 202 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 CIB4A0PJX0 185 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 RBFOX2O43251 390 aaKnown RBP eCLIP2.24□□□□□ -2.05
PSMA4-221ENST00000560842 GABARAPO95166 117 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 SLC25A14O95258 325 aaPredicted RBP2.24□□□□□ -2.05
PSMA4-221ENST00000560842 ADRA2AP08913 450 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 ZNF138P52744 262 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 ACTR1AP61163 376 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 PON2Q15165 354 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 COX19Q49B96 90 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 CEMP1Q6PRD7 247 aaPredicted RBP2.24□□□□□ -2.05
PSMA4-221ENST00000560842 NCCRP1Q6ZVX7 275 aaPredicted RBP2.24□□□□□ -2.05
PSMA4-221ENST00000560842 RIMKLAQ8IXN7 391 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 MYOCDQ8IZQ8 938 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 SDR9C7Q8NEX9 313 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 OR2L3Q8NG85 312 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 OR10J6PQ8NGY7 276 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 NARS2Q96I59 477 aaKnown RBP2.24□□□□□ -2.05
PSMA4-221ENST00000560842 OR10C1Q96KK4 312 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 ROPN1BQ9BZX4 212 aaPredicted RBP2.24□□□□□ -2.05
PSMA4-221ENST00000560842 SAV1Q9H4B6 383 aaPredicted RBP2.24□□□□□ -2.05
PSMA4-221ENST00000560842 CWH43Q9H720 699 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 SYNDIG1Q9H7V2 258 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 EXTL2Q9UBQ6 330 aa2.24□□□□□ -2.05
PSMA4-221ENST00000560842 COL27A1Q8IZC6 1860 aaPredicted RBP2.24□□□□□ -2.05
PSMA4-221ENST00000560842 CABIN1Q9Y6J0 2220 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 RPL36A-HNRNPH2H7BZ11 118 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 GOSR2O14653 212 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 PSTPIP1O43586 416 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 HLA-DPB1P04440 258 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 FABP3P05413 133 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 MX1P20591 662 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 AQP2P41181 271 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 NUTF2P61970 127 aaKnown RBP2.23□□□□□ -2.05
PSMA4-221ENST00000560842 KCNJ2P63252 427 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 CLINT1Q14677 625 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 SF3A2Q15428 464 aaKnown RBP2.23□□□□□ -2.05
PSMA4-221ENST00000560842 PHYHD1Q5SRE7 291 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 CENPPQ6IPU0 288 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 SLC25A34Q6PIV7 304 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 OR8J1Q8NGP2 316 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 SYNPRQ8TBG9 265 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 NT5C3BQ969T7 300 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 FAM3DQ96BQ1 224 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 SLC25A2Q9BXI2 301 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 SPNS1Q9H2V7 528 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 ZDHHC4Q9NPG8 344 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 SLC7A8Q9UHI5 535 aa2.23□□□□□ -2.05
PSMA4-221ENST00000560842 AHDC1Q5TGY3 1603 aaPredicted RBP2.23□□□□□ -2.05
PSMA4-221ENST00000560842 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.22□□□□□ -2.05
PSMA4-221ENST00000560842 MAPK8IP3Q9UPT6 1336 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 C7orf66A4D0T2 115 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 BTBD17A6NE02 478 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 DYNC1I1O14576 645 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 RRP8O43159 456 aaKnown RBP2.22□□□□□ -2.05
PSMA4-221ENST00000560842 GCM2O75603 506 aaPredicted RBP2.22□□□□□ -2.05
PSMA4-221ENST00000560842 YIF1AO95070 293 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 AIFM1O95831 613 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 POLR2MP0CAP2 368 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 CCNB1P14635 433 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 IFNA8P32881 189 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 PRPHP41219 470 aa2.22□□□□□ -2.05
PSMA4-221ENST00000560842 SSR4P51571 173 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms