RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 KCTD18Q6PI47 426 aaPredicted RBP11.5□□□□□ -0.57
SNX1-211ENST00000560829 ESPNLQ6ZVH7 1005 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 PARP16Q8N5Y8 322 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 MDS2Q8NDY4 140 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 OR13C5Q8NGS8 318 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 HSD17B8Q92506 261 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 SFXN2Q96NB2 322 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 FOXN4Q96NZ1 517 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 PDCD1LG2Q9BQ51 273 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 SF3B5Q9BWJ5 86 aaKnown RBP11.5□□□□□ -0.57
SNX1-211ENST00000560829 ZNF703Q9H7S9 590 aaPredicted RBP11.5□□□□□ -0.57
SNX1-211ENST00000560829 FRRS1LQ9P0K9 344 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 ING1Q9UK53 422 aaPredicted RBP11.5□□□□□ -0.57
SNX1-211ENST00000560829 CMAHPQ9Y471 501 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 OR5H15A6NDH6 313 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 TNFSF11O14788 317 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 MPZL1O95297 269 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 HPNP05981 417 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 NR2C1P13056 603 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ZNF823P16415 610 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 GDF1P27539 372 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 CCR9P51686 369 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 CLDN20P56880 219 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 CLRN1P58418 232 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 CAMK2DQ13557 499 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 SPANXN2Q5MJ10 180 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 WIPI1Q5MNZ9 446 aaPredicted RBP11.49□□□□□ -0.57
SNX1-211ENST00000560829 FAM27D1Q5T7N8 215 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ATP1A1-AS1Q5TC04 95 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 SLC25A47Q6Q0C1 308 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 LRRC69Q6ZNQ3 347 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 LINC00696Q6ZRV3 163 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 CREB3L2Q70SY1 520 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 SULF2Q8IWU5 870 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 OR2G2Q8NGZ5 317 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 OR52N5Q8NH56 324 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 RNF128Q8TEB7 428 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 RGP1Q92546 391 aaPredicted RBP11.49□□□□□ -0.57
SNX1-211ENST00000560829 CEP19Q96LK0 163 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ATF6BQ99941 703 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 SH3GL3Q99963 347 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 SLC30A2Q9BRI3 323 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ABHD6Q9BV23 337 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 MROQ9BYG7 248 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 B4GALT7Q9UBV7 327 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 EP300Q09472 2414 aaPredicted RBP11.49□□□□□ -0.57
SNX1-211ENST00000560829 FREM2Q5SZK8 3169 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ARPC4-TTLL3A0A0A6YYG9 625 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 A0A1B0GVG6 124 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ARGFXA6NJG6 315 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 OR4C45A6NMZ5 311 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ZNF726A6NNF4 738 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 RGS5O15539 181 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 TLX3O43711 291 aaPredicted RBP11.49□□□□□ -0.57
SNX1-211ENST00000560829 NME2P1O60361 137 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 RPP14O95059 124 aaKnown RBP11.49□□□□□ -0.57
SNX1-211ENST00000560829 NME2P22392 152 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 LAP3P28838 519 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ZNF133P52736 654 aaPredicted RBP11.49□□□□□ -0.57
SNX1-211ENST00000560829 CAV3P56539 151 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 IFITM3Q01628 133 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 EIF2B1Q14232 305 aaKnown RBP11.49□□□□□ -0.57
SNX1-211ENST00000560829 RTP5Q14D33 572 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 HYAL4Q2M3T9 481 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 DDI2Q5TDH0 399 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 AGAP7PQ5VUJ5 663 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 DEGS2Q6QHC5 323 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 NR2C2APQ86WQ0 139 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 LAX1Q8IWV1 398 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ST7LQ8TDW4 575 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ACOT12Q8WYK0 555 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 NSMAFQ92636 917 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 KCTD12Q96CX2 325 aaKnown RBP11.49□□□□□ -0.57
SNX1-211ENST00000560829 C4orf45Q96LM5 186 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 AGAP4Q96P64 663 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 DCBLD2Q96PD2 775 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 SRXN1Q9BYN0 137 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 MIXL1Q9H2W2 232 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 ELOVL3Q9HB03 270 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 DLL3Q9NYJ7 618 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 PLA2G3Q9NZ20 509 aa11.49□□□□□ -0.57
SNX1-211ENST00000560829 KLF13Q9Y2Y9 288 aaPredicted RBP11.49□□□□□ -0.57
SNX1-211ENST00000560829 SMIM30A4D0T7 59 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 TMEM212A6NML5 194 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 LOC110117498-PIK3R3F6TDL0 507 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 SMAD9O15198 467 aaKnown RBP11.48□□□□□ -0.57
SNX1-211ENST00000560829 ZNF254O75437 659 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 TRAPPC6AO75865 159 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 SP1P08047 785 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 RASGEF1BQ0VAM2 473 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 MFAP5Q13361 173 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 CAMK2BQ13554 666 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 KCNMB1Q16558 191 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 OTPQ5XKR4 325 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 HBMQ6B0K9 141 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 SLC25A25Q6KCM7 469 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 LRRN1Q6UXK5 716 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 OR9K2Q8NGE7 335 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 OR5AK2Q8NH90 309 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 OR2V1Q8NHB1 315 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms