RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 RAP1AP62834 184 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 LOXL1Q08397 574 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 TOP3AQ13472 1001 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 MTX3Q5HYI7 312 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 FGD3Q5JSP0 725 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 FAM122BQ7Z309 247 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 HIPK1Q86Z02 1210 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 ARIH2OSQ8N7S6 290 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 NABP1Q96AH0 204 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 FBXO17Q96EF6 278 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 RBP7Q96R05 134 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 GPX7Q96SL4 187 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 SH3GL3Q99963 347 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 C1orf21Q9H246 121 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 PLK3Q9H4B4 646 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 SIAEQ9HAT2 523 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 FBXO9Q9UK97 447 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 PMF1-BGLAPU3KQ54 211 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 V9GYQ6 96 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 YLPM1P49750 1951 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 AHCYL1O43865 530 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 SLC2A10O95528 541 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 FABP3P05413 133 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 MMP7P09237 267 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 NPR2P20594 1047 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 ATP6V1B2P21281 511 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 THBS4P35443 961 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 MAGEA2P43356 314 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 EFNA4P52798 201 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 FMODQ06828 376 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 CD47Q08722 323 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 DAG1Q14118 895 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 RAB39AQ14964 217 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 SLC36A2Q495M3 483 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 RINLQ6ZS11 566 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 FOXL2NBQ6ZUU3 175 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 CXXC5Q7LFL8 322 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 ZER1Q7Z7L7 766 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 HTRA1Q92743 480 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 MCUR1Q96AQ8 359 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 KRCC1Q9NPI7 259 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 NRIP3Q9NQ35 241 aa13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 PRPF19Q9UMS4 504 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-210ENST00000560383 TCRBV5S2A0A599 114 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 A8MV72 311 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 VSTM5A8MXK1 200 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 NDUFB2O95178 105 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 GADD45GO95257 159 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 GLRXP35754 106 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 HMGA2P52926 109 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 FXYD6P3P58550 94 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 SNRPD2P62316 118 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 ERVK-25P63136 954 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 SNTB2Q13425 540 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 TRIM25Q14258 630 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 TMEM249Q2WGJ8 235 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 C6orf52Q5T4I8 152 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 FAM27BQ5VT28 67 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 GPR139Q6DWJ6 353 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 LCN8Q6JVE9 175 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 TMEM53Q6P2H8 277 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 VHLLQ6RSH7 139 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 SLC16A14Q7RTX9 510 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 ZNF525Q8N782 197 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 CLDN22Q8N7P3 220 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 OR52J3Q8NH60 311 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 FAM168AQ92567 244 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 RSRC1Q96IZ7 334 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 DOK1Q99704 481 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 GPA33Q99795 319 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 NDEL1Q9GZM8 345 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 C1orf198Q9H425 327 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 TAS2R1Q9NYW7 299 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 ADAM18Q9Y3Q7 739 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 SPEF1Q9Y4P9 236 aa13.09□□□□□ -0.31
SNRPA1-210ENST00000560383 FBN3Q75N90 2809 aa13.08□□□□□ -0.31
SNRPA1-210ENST00000560383 TMEM129A0AVI4 362 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 SNAP29O95721 258 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 F12P00748 615 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 CDAP32320 146 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 RPL4P36578 427 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 EVX1P49640 407 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 PPOXP50336 477 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 MS4A2Q01362 244 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 SPIBQ01892 262 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 MESTQ5EB52 335 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 KRT80Q6KB66 452 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 CYP2R1Q6VVX0 501 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 THSD4Q6ZMP0 1018 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 TRPM8Q7Z2W7 1104 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 ZDHHC21Q8IVQ6 265 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 BCAS4Q8TDM0 211 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 C10orf105Q8TEF2 133 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 POP5Q969H6 163 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 Q96M85 177 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms