RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 OR2T12Q8NG77 320 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 PRRC1Q96M27 445 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 ZNF583Q96ND8 569 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 ALG12Q9BV10 488 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 C19orf24Q9BVV8 132 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 TXNIPQ9H3M7 391 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 HINT3Q9NQE9 182 aaKnown RBP10.51□□□□□ -0.73
SPG11-219ENST00000559822 ZNF275Q9NSD4 429 aaPredicted RBP10.51□□□□□ -0.73
SPG11-219ENST00000559822 C20orf141Q9NUB4 165 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 NKIRAS2Q9NYR9 191 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 CAPN7Q9Y6W3 813 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 SLC22A2O15244 555 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 PPIHO43447 177 aaKnown RBP10.5□□□□□ -0.73
SPG11-219ENST00000559822 TCF21O43680 179 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 SHOX2O60902 331 aaPredicted RBP10.5□□□□□ -0.73
SPG11-219ENST00000559822 MMP7P09237 267 aaPredicted RBP10.5□□□□□ -0.73
SPG11-219ENST00000559822 TSPAN19P0C672 248 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 CCL2P13500 99 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 COL8A2P25067 703 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 KDELR2P33947 212 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 OR1E2P47887 323 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 RUNX1T1Q06455 604 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 ANKDD1AQ495B1 522 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 FAM209AQ5JX71 171 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 ARMC4Q5T2S8 1044 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 MICU2Q8IYU8 434 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 ALDH16A1Q8IZ83 802 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 PAQR4Q8N4S7 273 aaPredicted RBP10.5□□□□□ -0.73
SPG11-219ENST00000559822 TEX29Q8N6K0 151 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 ICA1LQ8NDH6 482 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 OR51F2Q8NH61 342 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 CLDND2Q8NHS1 167 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 TPD52L3Q96J77 140 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 RBP7Q96R05 134 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 OR51B6Q9H340 312 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 SAR1AQ9NR31 198 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 FGFR1OP2Q9NVK5 253 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 EIF3KQ9UBQ5 218 aaKnown RBP10.5□□□□□ -0.73
SPG11-219ENST00000559822 HIF3AQ9Y2N7 669 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 GRIP1Q9Y3R0 1128 aa10.5□□□□□ -0.73
SPG11-219ENST00000559822 LOC100653049A0A140TA62 436 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 ELOVL7A1L3X0 281 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 TPD52L2O43399 206 aaKnown RBP10.49□□□□□ -0.73
SPG11-219ENST00000559822 KRT34O76011 436 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 NCR1O76036 304 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 SLC2A10O95528 541 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 CLPTM1O96005 669 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 IFNW1P05000 195 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 MSMBP08118 114 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 IFI30P13284 250 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 ANPEPP15144 967 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 CCNOP22674 350 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 STOMP27105 288 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 GCH1P30793 250 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 PCBD1P61457 104 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 SELENOWP63302 87 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 ALKBH6Q3KRA9 238 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 ZNF718Q3SXZ3 478 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 PABPC1L2AQ5JQF8 200 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 THEM4Q5T1C6 240 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 RINLQ6ZS11 566 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 CPEB3Q8NE35 698 aaKnown RBP10.49□□□□□ -0.73
SPG11-219ENST00000559822 OR1J1Q8NGS3 322 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 MOSPD2Q8NHP6 518 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 HDAC2Q92769 488 aaKnown RBP10.49□□□□□ -0.73
SPG11-219ENST00000559822 YIPF5Q969M3 257 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 TMEM186Q96B77 213 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 BPIFA2Q96DR5 249 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 NDEL1Q9GZM8 345 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 RACGAP1Q9H0H5 632 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 NARFLQ9H6Q4 476 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 DECR2Q9NUI1 292 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 HIF1ANQ9NWT6 349 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
SPG11-219ENST00000559822 PLSCR5A0PG75 271 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 A6NIZ1 184 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 RP2O75695 350 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 SASH3O75995 380 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 IGHV3-13P01766 116 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 IGHMP01871 453 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 GAAP10253 952 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 ZNF32P17041 273 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 CRYBB2P43320 205 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 MAGEB1P43366 347 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 SLC9A3P48764 834 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 GDI2P50395 445 aaKnown RBP10.48□□□□□ -0.73
SPG11-219ENST00000559822 RAP1BP61224 184 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 RPL27P61353 136 aaKnown RBP10.48□□□□□ -0.73
SPG11-219ENST00000559822 ERVS71-1P61550 626 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 RAP1AP62834 184 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 CCL8P80075 99 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 TOP3AQ13472 1001 aaPredicted RBP10.48□□□□□ -0.73
SPG11-219ENST00000559822 LAPTM4AQ15012 233 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 SGCAQ16586 387 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 FAM27BQ5VT28 67 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 SHQ1Q6PI26 577 aaKnown RBP10.48□□□□□ -0.73
SPG11-219ENST00000559822 ARL9Q6T311 187 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 OFCC1Q8IZS5 231 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 NSMAFQ92636 917 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 NABP1Q96AH0 204 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms