RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 ZNF250P15622 560 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 HTR2AP28223 471 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 SLC1A6P48664 564 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 DSTNP60981 165 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 ERVS71-1P61550 626 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 RPS23P62266 143 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 IL13RA1P78552 427 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 LRRC74AQ0VAA2 488 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 ZP4Q12836 540 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 GTDC1Q4AE62 458 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 RGS7BPQ6MZT1 257 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 TMEM154Q6P9G4 183 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 PIWIL3Q7Z3Z3 882 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 COMTD1Q86VU5 262 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 SIGLECL1Q8N7X8 197 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 LSMEM1Q8N8F7 131 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 ADPRHL1Q8NDY3 354 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 OR6N1Q8NGY5 312 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 SYNPRQ8TBG9 265 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 MGARPQ8TDB4 240 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 GTF3AQ92664 365 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 SLC38A4Q969I6 547 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 SLC35B4Q969S0 331 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 VPS33AQ96AX1 596 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 RAB39BQ96DA2 213 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 C1orf147Q96MC9 270 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 MOGAT1Q96PD6 335 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 DUX5Q96PT3 197 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 MEAF6Q9HAF1 191 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 TPT1P8Q9HAU6 139 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 BCL2L10Q9HD36 194 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 B3GAT2Q9NPZ5 323 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 NKIRAS2Q9NYR9 191 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 RPS6KB2Q9UBS0 482 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 SLC7A8Q9UHI5 535 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 HAO1Q9UJM8 370 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 IFT52Q9Y366 437 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 WIPI2Q9Y4P8 454 aa6.81□□□□□ -1.32
CTDSPL2-208ENST00000559793 PLPP3O14495 311 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 SDHDO14521 159 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 BIRC5O15392 142 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 TPST1O60507 370 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 UBL3O95164 117 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 RAB36O95755 333 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 GATA3P23771 443 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 PRTN3P24158 256 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 ZFP36P26651 326 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 RAD52P43351 418 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 UCP2P55851 309 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 LCN2P80188 198 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 PMS2P3Q13401 168 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 TOP3AQ13472 1001 aaPredicted RBP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 TSTQ16762 297 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 PCGF3Q3KNV8 242 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 MMEL1Q495T6 779 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 SPATS1Q496A3 300 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 ALG10BQ5I7T1 473 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 ULK3Q6PHR2 472 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 C5orf46Q6UWT4 87 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 USP51Q70EK9 711 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 DOK3Q7L591 496 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 PXKQ7Z7A4 578 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 BCL6BQ8N143 479 aaPredicted RBP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 MIER2Q8N344 545 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 SLC22A24Q8N4F4 322 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 OR6S1Q8NH40 331 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 ZNF519Q8TB69 540 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 C11orf40Q8WZ69 217 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 TAF15Q92804 592 aaKnown RBP eCLIP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 TMEM54Q969K7 222 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 MAL2Q969L2 176 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 SH3GL3Q99963 347 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 ULBP2Q9BZM5 246 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 ROPN1BQ9BZX4 212 aaPredicted RBP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 OR51B6Q9H340 312 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 WDR55Q9H6Y2 383 aaPredicted RBP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 UNKLQ9H9P5 680 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 ROPN1Q9HAT0 212 aaPredicted RBP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 SLCO1C1Q9NYB5 712 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 MRPL39Q9NYK5 338 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 DOCK11Q5JSL3 2073 aa6.8□□□□□ -1.32
CTDSPL2-208ENST00000559793 SLC22A23A1A5C7 686 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 CLDN25C9JDP6 229 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 TPST2O60704 377 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 SLC22A3O75751 556 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 SERPINI2O75830 405 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 ANP32DO95626 131 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 IL6P05231 212 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 LCKP06239 509 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 OR8G3PP0DMU2 310 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 MAKP20794 623 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 BGNP21810 368 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 AHCYP23526 432 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 EPHA3P29320 983 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 LSP1P33241 339 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 CSNK1A1P48729 337 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 KLF3P57682 345 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 SELENOVP59797 346 aa6.79□□□□□ -1.32
CTDSPL2-208ENST00000559793 PUDPQ08623 228 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms