RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ITGA2P17301 1181 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 ACHEP22303 614 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 RBM34P42696 430 aaKnown RBP11.55□□□□□ -0.56
VPS18-203ENST00000558855 ARFIP2P53365 341 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 DVL1P1P54792 670 aaPredicted RBP11.55□□□□□ -0.56
VPS18-203ENST00000558855 RPS23P62266 143 aaKnown RBP11.55□□□□□ -0.56
VPS18-203ENST00000558855 LCN6P62502 163 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 ERVK-25P63136 954 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 MRPS34P82930 218 aaKnown RBP11.55□□□□□ -0.56
VPS18-203ENST00000558855 TMEM53Q6P2H8 277 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 ICA1LQ8NDH6 482 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 ZNF519Q8TB69 540 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 TPD52L3Q96J77 140 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 POM121L2Q96KW2 1035 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 SIKE1Q9BRV8 207 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 WNT5BQ9H1J7 359 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 MS4A5Q9H3V2 200 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 POFUT1Q9H488 388 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 DCAF16Q9NXF7 216 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 FBXO9Q9UK97 447 aaPredicted RBP11.55□□□□□ -0.56
VPS18-203ENST00000558855 BAG5Q9UL15 447 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 HIF3AQ9Y2N7 669 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 SPEF1Q9Y4P9 236 aa11.55□□□□□ -0.56
VPS18-203ENST00000558855 TRAV27A0A087WT01 109 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 NME4O00746 187 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 CDC42EP2O14613 210 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 PRSS23O95084 383 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 VENTXO95231 258 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 IGF2P01344 180 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 LCKP06239 509 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 GAAP10253 952 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 IFI30P13284 250 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 UCP2P55851 309 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 KLF3P57682 345 aaPredicted RBP11.54□□□□□ -0.56
VPS18-203ENST00000558855 PSG4Q00888 419 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 GUCY1A3Q02108 690 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 DBPQ10586 325 aaPredicted RBP11.54□□□□□ -0.56
VPS18-203ENST00000558855 ENDOGQ14249 297 aaKnown RBP11.54□□□□□ -0.56
VPS18-203ENST00000558855 NKPD1Q17RQ9 610 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 SLC36A2Q495M3 483 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 MMEL1Q495T6 779 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 COQ5Q5HYK3 327 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 TREML1Q86YW5 311 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 OR2T12Q8NG77 320 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 OR1J1Q8NGS3 322 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 OR13C2Q8NGS9 318 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 SYNPRQ8TBG9 265 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 IPCEF1Q8WWN9 437 aaPredicted RBP11.54□□□□□ -0.56
VPS18-203ENST00000558855 RASSF5Q8WWW0 418 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 PRRC1Q96M27 445 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 TXNIPQ9H3M7 391 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 HINT3Q9NQE9 182 aaKnown RBP11.54□□□□□ -0.56
VPS18-203ENST00000558855 FBXL3Q9UKT7 428 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 ZNF346Q9UL40 294 aaKnown RBP11.54□□□□□ -0.56
VPS18-203ENST00000558855 MED31Q9Y3C7 131 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 DYSFO75923 2080 aa11.54□□□□□ -0.56
VPS18-203ENST00000558855 ZSCAN5BA6NJL1 495 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 BBIP1A8MTZ0 92 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 PPIHO43447 177 aaKnown RBP11.53□□□□□ -0.56
VPS18-203ENST00000558855 DEAF1O75398 565 aaPredicted RBP11.53□□□□□ -0.56
VPS18-203ENST00000558855 RGS9O75916 674 aaPredicted RBP11.53□□□□□ -0.56
VPS18-203ENST00000558855 FARS2O95363 451 aaKnown RBP11.53□□□□□ -0.56
VPS18-203ENST00000558855 NGFP01138 241 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 IGHMP01871 453 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 HNF1AP20823 631 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 CCNOP22674 350 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 DAP3P51398 398 aaKnown RBP11.53□□□□□ -0.56
VPS18-203ENST00000558855 ZNF84P51523 738 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 MVKQ03426 396 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 CD47Q08722 323 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 SGCAQ16586 387 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 TSTQ16762 297 aaKnown RBP11.53□□□□□ -0.56
VPS18-203ENST00000558855 TBC1D28Q2M2D7 210 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 NRN1LQ496H8 165 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 ALG10Q5BKT4 473 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 ERICH5Q6P6B1 374 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 TBPL2Q6SJ96 375 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 UGT2A3Q6UWM9 527 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 THSD4Q6ZMP0 1018 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 FOXL2NBQ6ZUU3 175 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 ZNF771Q7L3S4 317 aaPredicted RBP11.53□□□□□ -0.56
VPS18-203ENST00000558855 NRMQ8IXM6 262 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 SLC15A3Q8IY34 581 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.53□□□□□ -0.56
VPS18-203ENST00000558855 BPIFA2Q96DR5 249 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 MARS2Q96GW9 593 aaKnown RBP11.53□□□□□ -0.56
VPS18-203ENST00000558855 SIAEQ9HAT2 523 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 HIF1ANQ9NWT6 349 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 ADAM18Q9Y3Q7 739 aa11.53□□□□□ -0.56
VPS18-203ENST00000558855 A0A087WUU8 490 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 ELOVL7A1L3X0 281 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 NPIPB13A6NJU9 1138 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 CENPBD1B2RD01 187 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 NPIPB4C9JG80 1138 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 IGHV3-13P01766 116 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 MSMBP08118 114 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 TROVE2P10155 538 aaKnown RBP eCLIP11.52□□□□□ -0.57
VPS18-203ENST00000558855 THRBP10828 461 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 STOMP27105 288 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 LAP3P28838 519 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms