RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 GIPRP48546 466 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 PTDSS1P48651 473 aaKnown RBP7.36□□□□□ -1.23
TPM1-213ENST00000558400 ERVK-25P63136 954 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 TUBA1BP68363 451 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 TUBA4AP68366 448 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 MYBPC1Q00872 1141 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 GALK2Q01415 458 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 TSPAN31Q12999 210 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 TOP3AQ13472 1001 aaPredicted RBP7.36□□□□□ -1.23
TPM1-213ENST00000558400 SEC23BQ15437 767 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 RFX4Q33E94 735 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 Q5PR19 223 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 RPL13AP3Q6NVV1 102 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 SLC25A47Q6Q0C1 308 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 SMARCD3Q6STE5 483 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 UNQ6126/PRO20091Q6UXV3 157 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 TUBA1AQ71U36 451 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 YTHDF3Q7Z739 585 aaKnown RBP7.36□□□□□ -1.23
TPM1-213ENST00000558400 SYT9Q86SS6 491 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 ADCK1Q86TW2 530 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 WDFY1Q8IWB7 410 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 C1orf174Q8IYL3 243 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 ALDH16A1Q8IZ83 802 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 ZNF519Q8TB69 540 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 NMD3Q96D46 503 aaKnown RBP7.36□□□□□ -1.23
TPM1-213ENST00000558400 PERPQ96FX8 193 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 RSRC1Q96IZ7 334 aaKnown RBP7.36□□□□□ -1.23
TPM1-213ENST00000558400 ZNF75AQ96N20 296 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 ZNF442Q9H7R0 627 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 REEP1Q9H902 201 aa7.36□□□□□ -1.23
TPM1-213ENST00000558400 IGHV2OR16-5A0A0B4J2B6 119 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 TCRBV5S2A0A599 114 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 PRSS37A4D1T9 235 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 H7C417 338 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 ACOT8O14734 319 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 ARPC3O15145 178 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 RRP9O43818 475 aaKnown RBP7.35□□□□□ -1.23
TPM1-213ENST00000558400 TXNDC12O95881 172 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 ZNF35P13682 527 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 ZNF14P17017 642 aaPredicted RBP7.35□□□□□ -1.23
TPM1-213ENST00000558400 GSTM3P21266 225 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 ATP6V1B2P21281 511 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 NR4A1P22736 598 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 CRABP1P29762 137 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 SLC6A6P31641 620 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 GLRXP35754 106 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 RAD52P43351 418 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 EVX1P49640 407 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 DSCR9P59020 149 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 SELENOVP59797 346 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 RPS23P62266 143 aaKnown RBP7.35□□□□□ -1.23
TPM1-213ENST00000558400 SPOCK1Q08629 439 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 COX10Q12887 443 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 BNIP1Q12981 228 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 DAG1Q14118 895 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 EFNB3Q15768 340 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 SGCAQ16586 387 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 SWI5Q1ZZU3 235 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 OR2T5Q6IEZ7 315 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 PGM2L1Q6PCE3 622 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 FAM122BQ7Z309 247 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 IGFN1Q86VF2 1251 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 MEX3DQ86XN8 651 aaKnown RBP7.35□□□□□ -1.23
TPM1-213ENST00000558400 WFDC11Q8NEX6 87 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 OR2T29Q8NH02 315 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 NSMAFQ92636 917 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 CCDC124Q96CT7 223 aaKnown RBP7.35□□□□□ -1.23
TPM1-213ENST00000558400 SLC7A6OSQ96CW6 309 aaPredicted RBP7.35□□□□□ -1.23
TPM1-213ENST00000558400 C18orf12Q96KH6 178 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 Q96M85 177 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 ZNF570Q96NI8 536 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 TSPAN32Q96QS1 320 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 SNX18Q96RF0 628 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 SH3GL3Q99963 347 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 CHID1Q9BWS9 393 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 SEC61A2Q9H9S3 476 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 CCNB1IP1Q9NPC3 277 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 ZNF224Q9NZL3 707 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 CMAHPQ9Y471 501 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 TIMM10BQ9Y5J6 103 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 IER3IP1Q9Y5U9 82 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 LYVE1Q9Y5Y7 322 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 USF3Q68DE3 2245 aa7.35□□□□□ -1.23
TPM1-213ENST00000558400 ZNF503-AS2A6NEH8 195 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 C12orf71A8MTZ7 269 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 GNGT2O14610 69 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 GSC2O15499 205 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 KHDRBS3O75525 346 aaKnown RBP7.34□□□□□ -1.23
TPM1-213ENST00000558400 CCNB2O95067 398 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 SLC2A10O95528 541 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 SNAP29O95721 258 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 ERCC1P07992 297 aaPredicted RBP7.34□□□□□ -1.23
TPM1-213ENST00000558400 CELA3BP08861 270 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 CST2P09228 141 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 OR4A8P0C604 315 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 MSR1P21757 451 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 PCSK6P29122 969 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 NOS3P29474 1203 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 CALCRP30988 508 aa7.34□□□□□ -1.23
TPM1-213ENST00000558400 APLNRP35414 380 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms