RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PDLIM4P50479 330 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 ZNF84P51523 738 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 MRPS34P82930 218 aaKnown RBP7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 VLDLRP98155 873 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 FMODQ06828 376 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 LOXL1Q08397 574 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 TOP3AQ13472 1001 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 DGCR6Q14129 220 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 ANKDD1AQ495B1 522 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 TMEM53Q6P2H8 277 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 PODNL1Q6PEZ8 512 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 SLC16A14Q7RTX9 510 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 DPPA2Q7Z7J5 298 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 OAFQ86UD1 273 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 LRP11Q86VZ4 500 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 CYP4Z1Q86W10 505 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 CDK20Q8IZL9 346 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 PGAM4Q8N0Y7 254 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 PAQR4Q8N4S7 273 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 CLDN22Q8N7P3 220 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 ZNF519Q8TB69 540 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 MRPL24Q96A35 216 aaKnown RBP7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 NABP1Q96AH0 204 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 DHRS1Q96LJ7 313 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 FOXN4Q96NZ1 517 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 LRRC37BQ96QE4 947 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 TSPAN32Q96QS1 320 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 ALG12Q9BV10 488 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 MRPL37Q9BZE1 423 aaKnown RBP7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 ANKRD19PQ9H560 264 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 SIAEQ9HAT2 523 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 SMURF2Q9HAU4 748 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 TAGLN3Q9UI15 199 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 FBXO9Q9UK97 447 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 FBXL3Q9UKT7 428 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 SPEF1Q9Y4P9 236 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 FKBP7Q9Y680 259 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 MXRA5Q9NR99 2828 aa7.56□□□□□ -1.2
SNRPA1-206ENST00000558059 CUBNO60494 3623 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 TRBV4-1A0A0J9YWV2 114 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 SH3PXD2BA1X283 911 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 TLX2O43763 284 aaPredicted RBP7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 PTP4A3O75365 173 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 DIRAS1O95057 198 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 SEMG1P04279 462 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 CD14P08571 375 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 ADRA2AP08913 450 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 CCL2P13500 99 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 TCN1P20061 433 aaPredicted RBP7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 OMPP47874 163 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 LIMS1P48059 325 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 ERVK-25P63136 954 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 PPP2R2BQ00005 443 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 GALK2Q01415 458 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 CD47Q08722 323 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 SEC23BQ15437 767 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 SGCAQ16586 387 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 TMEM249Q2WGJ8 235 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 SLC36A2Q495M3 483 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 ZBED5Q49AG3 693 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 SAMD4BQ5PRF9 694 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 THEM4Q5T1C6 240 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 FAM205BPQ63HN1 556 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 PRIMA1Q86XR5 153 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 LRRC18Q8N456 261 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 ARIH2OSQ8N7S6 290 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 CPEB3Q8NE35 698 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 SLC30A7Q8NEW0 376 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 NSMAFQ92636 917 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 PYURFQ96I23 114 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 FAM46AQ96IP4 442 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 RBP7Q96R05 134 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 CDRT15Q96T59 188 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 FUZQ9BT04 418 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 RAB1BQ9H0U4 201 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 RNF121Q9H920 327 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 MYEF2Q9P2K5 600 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 SLC7A8Q9UHI5 535 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 SAMD4AQ9UPU9 718 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 TMEM5Q9Y2B1 443 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 FAM32AQ9Y421 112 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 WNK2Q9Y3S1 2297 aa7.55□□□□□ -1.2
SNRPA1-206ENST00000558059 FBN1P35555 2871 aaKnown RBP7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 LOC390937A0A1W2PQ73 354 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 A6NIZ1 184 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 NDUFS8O00217 210 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 ARPC2O15144 300 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 SYNGR3O43761 229 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 CRLF1O75462 422 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 GMNNO75496 209 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 DCTN3O75935 186 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 STAMBPO95630 424 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 SNAP29O95721 258 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 TP53P04637 393 aaPredicted RBP7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 SCG5P05408 212 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 NR2C1P13056 603 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 ZNF32P17041 273 aa7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 USF1P22415 310 aaPredicted RBP7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 APEX1P27695 318 aaKnown RBP7.54□□□□□ -1.2
SNRPA1-206ENST00000558059 NR4A2P43354 598 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms