RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ZNF519Q8TB69 540 aa12.53□□□□□ -0.4
SHMT2-235ENST00000557740 C10orf82Q8WW14 230 aa12.53□□□□□ -0.4
SHMT2-235ENST00000557740 NSMAFQ92636 917 aa12.53□□□□□ -0.4
SHMT2-235ENST00000557740 YIPF5Q969M3 257 aa12.53□□□□□ -0.4
SHMT2-235ENST00000557740 ZNF583Q96ND8 569 aa12.53□□□□□ -0.4
SHMT2-235ENST00000557740 SIAEQ9HAT2 523 aa12.53□□□□□ -0.4
SHMT2-235ENST00000557740 SMURF2Q9HAU4 748 aa12.53□□□□□ -0.4
SHMT2-235ENST00000557740 SAR1AQ9NR31 198 aa12.53□□□□□ -0.4
SHMT2-235ENST00000557740 CAPN7Q9Y6W3 813 aa12.53□□□□□ -0.4
SHMT2-235ENST00000557740 IGLV3-9A0A075B6K5 115 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 LOC100653049A0A140TA62 436 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 C17orf100A8MU93 164 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 TCF21O43680 179 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 PIP5K1CO60331 668 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 SASH3O75995 380 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 KRT34O76011 436 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 MMP7P09237 267 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-235ENST00000557740 ZNF250P15622 560 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 DRD4P21917 467 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 CCNOP22674 350 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 CDAP32320 146 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 MAGEB1P43366 347 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 UCP2P55851 309 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 CCL8P80075 99 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 GLO1Q04760 184 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 FMODQ06828 376 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 ST3GAL3Q11203 375 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 TAF11Q15544 211 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 SGCAQ16586 387 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 MOGQ16653 247 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 PCGF3Q3KNV8 242 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 ALG10Q5BKT4 473 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 PABPC1L2AQ5JQF8 200 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 ARMC4Q5T2S8 1044 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 RFLNBQ8N5W9 214 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 LIPHQ8WWY8 451 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 LZICQ8WZA0 190 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 PRRC1Q96M27 445 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 TSPAN32Q96QS1 320 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 TXNIPQ9H3M7 391 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 LPAR2Q9HBW0 351 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 TREM2Q9NZC2 230 aa12.52□□□□□ -0.41
SHMT2-235ENST00000557740 TPD52L2O43399 206 aaKnown RBP12.51□□□□□ -0.41
SHMT2-235ENST00000557740 CDC14BO60729 498 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 RP2O75695 350 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 IFI30P13284 250 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 KDELR2P33947 212 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 ZNF133P52736 654 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-235ENST00000557740 SHQ1Q6PI26 577 aaKnown RBP12.51□□□□□ -0.41
SHMT2-235ENST00000557740 MICU2Q8IYU8 434 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 OR51F2Q8NH61 342 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 HDAC2Q92769 488 aaKnown RBP12.51□□□□□ -0.41
SHMT2-235ENST00000557740 TMEM186Q96B77 213 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 BPIFA2Q96DR5 249 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 ALG12Q9BV10 488 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 DECR2Q9NUI1 292 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 HIF1ANQ9NWT6 349 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 EIF3KQ9UBQ5 218 aaKnown RBP12.51□□□□□ -0.41
SHMT2-235ENST00000557740 GRIP1Q9Y3R0 1128 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 UGT2A1Q9Y4X1 527 aa12.51□□□□□ -0.41
SHMT2-235ENST00000557740 ELOVL7A1L3X0 281 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 HTR3EA5X5Y0 456 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 FAM157AC9JC47 383 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 MSMBP08118 114 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 TSPAN19P0C672 248 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 GAAP10253 952 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 ZNF32P17041 273 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 STOMP27105 288 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 GCH1P30793 250 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 GUCA1AP43080 201 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-235ENST00000557740 GDI2P50395 445 aaKnown RBP12.5□□□□□ -0.41
SHMT2-235ENST00000557740 RPL27P61353 136 aaKnown RBP12.5□□□□□ -0.41
SHMT2-235ENST00000557740 TEKQ02763 1124 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 LAPTM4AQ15012 233 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 FAM205BPQ63HN1 556 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 CGB2Q6NT52 195 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 UNQ6126/PRO20091Q6UXV3 157 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 ARPINQ7Z6K5 226 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
SHMT2-235ENST00000557740 OR1J1Q8NGS3 322 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 FNDC8Q8TC99 324 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 NABP1Q96AH0 204 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 RCN3Q96D15 328 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 NMD3Q96D46 503 aaKnown RBP12.5□□□□□ -0.41
SHMT2-235ENST00000557740 RBP7Q96R05 134 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 FNDC11Q9BVV2 318 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 RACGAP1Q9H0H5 632 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 NKIRAS2Q9NYR9 191 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 HIF3AQ9Y2N7 669 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 AP3M1Q9Y2T2 418 aa12.5□□□□□ -0.41
SHMT2-235ENST00000557740 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 IGHV1-69-2A0A0G2JMI3 117 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 C5orf49A4QMS7 147 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 HAX1O00165 279 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 WNT9BO14905 357 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 SLC22A2O15244 555 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 IGHMP01871 453 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 IFNW1P05000 195 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 ERVK-25P63136 954 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 SELENOWP63302 87 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms