RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 FMODQ06828 376 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 MESTQ5EB52 335 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 PGBD2Q6P3X8 592 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 THSD4Q6ZMP0 1018 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF771Q7L3S4 317 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-209ENST00000557342 SPATA24Q86W54 205 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 TGIF2LYQ8IUE0 185 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 LRRC18Q8N456 261 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 NUP37Q8NFH4 326 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 CANT1Q8WVQ1 401 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF75AQ96N20 296 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 SH3GL3Q99963 347 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 OR52D1Q9H346 318 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 C1orf198Q9H425 327 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 CCNB1IP1Q9NPC3 277 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 CA10Q9NS85 328 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 SPEF1Q9Y4P9 236 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 IER3IP1Q9Y5U9 82 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 PLCE1Q9P212 2302 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 IGKV1D-43A0A0B4J1Z2 117 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 IGHV2OR16-5A0A0B4J2B6 119 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 IQCMA0A1B0GVH7 501 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 TCRBV3S1A0A5B6 114 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 SLC22A23A1A5C7 686 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 SOCS2O14508 198 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 GNGT2O14610 69 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 ARPC3O15145 178 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 IDH3BO43837 385 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 CD8AP01732 235 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 SERPINA5P05154 406 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 ATP5J2P56134 94 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 FXYD6P3P58550 94 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 PLP2Q04941 152 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 RAB39AQ14964 217 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 SGCAQ16586 387 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 MICAQ29983 383 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 Q5PR19 223 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 FAM27BQ5VT28 67 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 ZNF620Q6ZNG0 422 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 MYPOPQ86VE0 399 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-209ENST00000557342 CLDN22Q8N7P3 220 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 OR9Q2Q8NGE9 314 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 OR52L1Q8NGH7 329 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 OR1J2Q8NGS2 313 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 NABP1Q96AH0 204 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 RASD2Q96D21 266 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 ERMAPQ96PL5 475 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-209ENST00000557342 WACQ9BTA9 647 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 IFT27Q9BW83 186 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 ZNF442Q9H7R0 627 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 SEC61A2Q9H9S3 476 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 NOX3Q9HBY0 568 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 IL20RAQ9UHF4 553 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 SLC7A8Q9UHI5 535 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 FBXO9Q9UK97 447 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-209ENST00000557342 UGT2A1Q9Y4X1 527 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 U3KQV3 271 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 ARID1AO14497 2285 aa10.83□□□□□ -0.68
SLIRP-209ENST00000557342 A0A1W2PPL8 197 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 H7C1C5 153 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 KHDRBS3O75525 346 aaKnown RBP10.82□□□□□ -0.68
SLIRP-209ENST00000557342 PPP1R3DO95685 299 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 GASTP01350 101 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 CST2P09228 141 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 PATE4P0C8F1 98 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 ZNF35P13682 527 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 GSTM3P21266 225 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 MSR1P21757 451 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 NOS3P29474 1203 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 CRABP1P29762 137 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 CDAP32320 146 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 PCBD1P61457 104 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 LCN6P62502 163 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 GALK2Q01415 458 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 HSF2Q03933 536 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 DAG1Q14118 895 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 ETFDHQ16134 617 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 C11orf71Q6IPW1 123 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 ZNF770Q6IQ21 691 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-209ENST00000557342 DNM1P34Q6PK57 102 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 RASSF6Q6ZTQ3 369 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 JAZF1Q86VZ6 243 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 AQP11Q8NBQ7 271 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 FGFBP3Q8TAT2 258 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 SAMD8Q96LT4 415 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 SNX18Q96RF0 628 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 DGCR6LQ9BY27 220 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 LRMDAQ9H2I8 198 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 BARX1Q9HBU1 254 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-209ENST00000557342 IL20Q9NYY1 176 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 VSX1Q9NZR4 365 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-209ENST00000557342 CDH10Q9Y6N8 788 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 PMF1-BGLAPU3KQ54 211 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
SLIRP-209ENST00000557342 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 ARRDC5A6NEK1 342 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 B9A039 149 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 SLC16A7O60669 478 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms