RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 SIAEQ9HAT2 523 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 CA10Q9NS85 328 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 IL20RAQ9UHF4 553 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 TEX13CA0A0J9YWL9 993 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 SLC22A23A1A5C7 686 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 H7C1C5 153 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 TXNDC12O95881 172 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 APEHP13798 732 aaKnown RBP19.81■□□□□ 0.76
TDP1-216ENST00000556867 CDAP32320 146 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 CDKN1AP38936 164 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 LCN6P62502 163 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 TSPAN31Q12999 210 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 SLC36A2Q495M3 483 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 FOXL2NBQ6ZUU3 175 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 SLC16A14Q7RTX9 510 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 YTHDF3Q7Z739 585 aaKnown RBP19.81■□□□□ 0.76
TDP1-216ENST00000556867 RASD2Q96D21 266 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 TRMT61AQ96FX7 289 aaKnown RBP19.81■□□□□ 0.76
TDP1-216ENST00000556867 OR52D1Q9H346 318 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 ARFGEF3Q5TH69 2177 aa19.81■□□□□ 0.76
TDP1-216ENST00000556867 DHRS12A0PJE2 317 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 PRSS37A4D1T9 235 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 SERPINA5P05154 406 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 HOXB6P17509 224 aaKnown RBP19.8■□□□□ 0.76
TDP1-216ENST00000556867 RPS6KA3P51812 740 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 FLOT2Q14254 428 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 RAB39AQ14964 217 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 RFX4Q33E94 735 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 ZNF770Q6IQ21 691 aaPredicted RBP19.8■□□□□ 0.76
TDP1-216ENST00000556867 TMEM53Q6P2H8 277 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 ADCK1Q86TW2 530 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 ZNF584Q8IVC4 421 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 OR9Q2Q8NGE9 314 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 CADM1Q9BY67 442 aaKnown RBP19.8■□□□□ 0.76
TDP1-216ENST00000556867 ZNF442Q9H7R0 627 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 REEP1Q9H902 201 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 VNN3Q9NY84 501 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 POMPQ9Y244 141 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 IER3IP1Q9Y5U9 82 aa19.8■□□□□ 0.76
TDP1-216ENST00000556867 GSC2O15499 205 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 ATP5HO75947 161 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 CCNB2O95067 398 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 MMP7P09237 267 aaPredicted RBP19.79■□□□□ 0.76
TDP1-216ENST00000556867 ZNF35P13682 527 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 CD99P14209 185 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 SLC6A6P31641 620 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 RASSF2P50749 326 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 GK3PQ14409 553 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 FAM27BQ5VT28 67 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 ZNF620Q6ZNG0 422 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 CANT1Q8WVQ1 401 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 CHID1Q9BWS9 393 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 RNF121Q9H920 327 aa19.79■□□□□ 0.76
TDP1-216ENST00000556867 SAMHD1Q9Y3Z3 626 aaKnown RBP19.79■□□□□ 0.76
TDP1-216ENST00000556867 PPP1R3DO95685 299 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 ADIPOQQ15848 244 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 SGCAQ16586 387 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 LRRC18Q8N456 261 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 CACNG6Q9BXT2 260 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 KCNN2Q9H2S1 579 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 C1orf198Q9H425 327 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 DLL4Q9NR61 685 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 VSX1Q9NZR4 365 aaPredicted RBP19.78■□□□□ 0.76
TDP1-216ENST00000556867 SLC7A8Q9UHI5 535 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 RTTNQ86VV8 2226 aa19.78■□□□□ 0.76
TDP1-216ENST00000556867 TCRBV3S1A0A5B6 114 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 H7C417 338 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 SOCS2O14508 198 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 IMPA2O14732 288 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 ARPC3O15145 178 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 NR4A1P22736 598 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 SERPINF1P36955 418 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 PPP1R8Q12972 351 aaKnown RBP19.77■□□□□ 0.76
TDP1-216ENST00000556867 SNTB2Q13425 540 aaKnown RBP19.77■□□□□ 0.76
TDP1-216ENST00000556867 DAG1Q14118 895 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 ETFDHQ16134 617 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 SWI5Q1ZZU3 235 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 MST1LQ2TV78 715 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 VHLLQ6RSH7 139 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 SPATA24Q86W54 205 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 SAMD8Q96LT4 415 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 ERMAPQ96PL5 475 aaPredicted RBP19.77■□□□□ 0.76
TDP1-216ENST00000556867 SYT4Q9H2B2 425 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 CDH10Q9Y6N8 788 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 U3KQV3 271 aa19.77■□□□□ 0.76
TDP1-216ENST00000556867 A0A1W2PPL8 197 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 CST1P01037 141 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 IGHV4-39P01824 125 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 CST2P09228 141 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 OR4A8P0C604 315 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 BMP4P12644 408 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 CTLA4P16410 223 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 MSR1P21757 451 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 THBS4P35443 961 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 GUCA1AP43080 201 aaPredicted RBP19.76■□□□□ 0.75
TDP1-216ENST00000556867 EFNB3Q15768 340 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 MICAQ29983 383 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 RPL13AP3Q6NVV1 102 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 PTCHD4Q6ZW05 846 aa19.76■□□□□ 0.75
TDP1-216ENST00000556867 AQP11Q8NBQ7 271 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms