RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 SPATA5L1Q9BVQ7 753 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 RACGAP1Q9H0H5 632 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 TMEM38AQ9H6F2 299 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 MRPL39Q9NYK5 338 aaKnown RBP8.57□□□□□ -1.04
SCFD1-220ENST00000556486 SLC25A37Q9NYZ2 338 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 FBXL3Q9UKT7 428 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 CMAHPQ9Y471 501 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 NOX1Q9Y5S8 564 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 NOTCH1P46531 2555 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 TRBV5-3A0A0A0MS03 114 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 A0A0B4J2E0 115 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 A0A1B0GX12 115 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 M0R233 179 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 M0R3H8 397 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 HPRP00739 348 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 BGLAPP02818 100 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 MSMBP08118 114 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 PPIBP23284 216 aaKnown RBP8.56□□□□□ -1.04
SCFD1-220ENST00000556486 ARFIP2P53365 341 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 MSMPQ1L6U9 139 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 GSG1Q2KHT4 349 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 PHYHD1Q5SRE7 291 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 REP15Q6BDI9 236 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 REEP3Q6NUK4 255 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 EPGNQ6UW88 154 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 PXKQ7Z7A4 578 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 SNX32Q86XE0 403 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 KRT73Q86Y46 540 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 UEVLDQ8IX04 471 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 MSRB3Q8IXL7 192 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 RAB24Q969Q5 203 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 SLC47A1Q96FL8 570 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 EPYCQ99645 322 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 PAIP2Q9BPZ3 127 aaKnown RBP8.56□□□□□ -1.04
SCFD1-220ENST00000556486 TMEM43Q9BTV4 400 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 CENPHQ9H3R5 247 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 SLC52A3Q9NQ40 469 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF224Q9NZL3 707 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 RPS6KB2Q9UBS0 482 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 GRIP1Q9Y3R0 1128 aa8.56□□□□□ -1.04
SCFD1-220ENST00000556486 PRORSD1PA6NEY8 169 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 C5orf58C9J3I9 102 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 FMO6PO60774 539 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 TGDSO95455 350 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 PNPP00491 289 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 MT-ATP6P00846 226 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 HLA-HP01893 362 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 GAAP10253 952 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 SAGP10523 405 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-220ENST00000556486 HLA-DOBP13765 273 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 GPX2P18283 190 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 ACHEP22303 614 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 COL8A2P25067 703 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 GPR6P46095 362 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-220ENST00000556486 RPS23P62266 143 aaKnown RBP8.55□□□□□ -1.04
SCFD1-220ENST00000556486 UBA52P62987 128 aaKnown RBP8.55□□□□□ -1.04
SCFD1-220ENST00000556486 CDK6Q00534 326 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 PUDPQ08623 228 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 NPRL3Q12980 569 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 ELFN2Q5R3F8 820 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 GCNT6Q5T4J0 391 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 SLC2A7Q6PXP3 512 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 PIWIL3Q7Z3Z3 882 aaKnown RBP8.55□□□□□ -1.04
SCFD1-220ENST00000556486 FUNDC1Q8IVP5 155 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 C10orf111Q8N326 155 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 BPIFB2Q8N4F0 458 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 MRPL37Q9BZE1 423 aaKnown RBP8.55□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF385DQ9H6B1 395 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 UNKLQ9H9P5 680 aaKnown RBP8.55□□□□□ -1.04
SCFD1-220ENST00000556486 B3GAT2Q9NPZ5 323 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 GPR160Q9UJ42 338 aa8.55□□□□□ -1.04
SCFD1-220ENST00000556486 M0R3G1 203 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 PLPP3O14495 311 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 TPST1O60507 370 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 TPST2O60704 377 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 ENTPD5O75356 428 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 SERPINB7O75635 380 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 TFP02787 698 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 HPXP02790 462 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 NQO1P15559 274 aaKnown RBP8.54□□□□□ -1.04
SCFD1-220ENST00000556486 LIMS1P48059 325 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 TMEM33P57088 247 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 SRSF4Q08170 494 aaKnown RBP8.54□□□□□ -1.04
SCFD1-220ENST00000556486 SCGB2A2Q13296 93 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 MAD2L1BPQ15013 274 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-220ENST00000556486 TRMT5Q32P41 509 aaKnown RBP8.54□□□□□ -1.04
SCFD1-220ENST00000556486 MMEL1Q495T6 779 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 NRN1LQ496H8 165 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 GLIPR1L2Q4G1C9 344 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 AVPI1Q5T686 147 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 KRT80Q6KB66 452 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 MZT2AQ6P582 158 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF813Q6ZN06 617 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 USP43Q70EL4 1123 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 OR51F2Q8NH61 342 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 NFKBIDQ8NI38 313 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 TLCD1Q96CP7 247 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 C7orf26Q96N11 449 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 MOGAT1Q96PD6 335 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 SUCNR1Q9BXA5 334 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms