RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 FLVCR1Q9Y5Y0 555 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 FN1P02751 2386 aaKnown RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 TLN2Q9Y4G6 2542 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ABCA1O95477 2261 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 IGKV1D-42A0A075B6H8 117 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 A0A1B0GWA3 101 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 DPRXA6NFQ7 191 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 OR5H1A6NKK0 313 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SHISA9B4DS77 424 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 FTCDNL1E5RQL4 147 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 FXYD1O00168 92 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 HS3ST1O14792 307 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 TPST1O60507 370 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 EIF1BO60739 113 aaKnown RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SMPD2O60906 423 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 TMCC2O75069 709 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 AKR7A3O95154 331 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 AHSA1O95433 338 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 IGHV3-9P01782 118 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 UQCRBP14927 111 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ETS2P15036 469 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 GPX2P18283 190 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 GGT1P19440 569 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 PPIBP23284 216 aaKnown RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 FKBP2P26885 142 aaKnown RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF84P51523 738 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 RIPPLY3P57055 190 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 MTPNP58546 118 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SLC35A1P78382 337 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 HOXC5Q00444 222 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 CDK6Q00534 326 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 EGR4Q05215 589 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SPOCK1Q08629 439 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 BNIP2Q12982 314 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 CEACAM7Q14002 265 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SCARB2Q14108 478 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 CAPRIN1Q14444 709 aaKnown RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SLC17A1Q14916 467 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 PPA1Q15181 289 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 OR7A5Q15622 319 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 TWIST1Q15672 202 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 GLIPR1L2Q4G1C9 344 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 RUNDC3AQ59EK9 446 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF311Q5JNZ3 666 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 Q5PR19 223 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 TIMM23BQ5SRD1 257 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 OTUD3Q5T2D3 398 aaPredicted RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 C1orf140Q5VVS0 124 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SHEQ5VZ18 495 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 FBXW9Q5XUX1 488 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 CGB2Q6NT52 195 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ADAM5Q6NVV9 412 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 PRSS57Q6UWY2 283 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 CASP12Q6UXS9 341 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 B3GLCTQ6Y288 498 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 NET1Q7Z628 596 aaPredicted RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 DHDDSQ86SQ9 333 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 PTOV1Q86YD1 416 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF100Q8IYN0 542 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 CADM2Q8N3J6 435 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM99Q8N816 258 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF611Q8N823 705 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 LSMEM1Q8N8F7 131 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ZIC4Q8N9L1 334 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 KBTBD8Q8NFY9 601 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 GPR32P1Q8NGA4 272 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 OR9K2Q8NGE7 335 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 MPLKIPQ8TAP9 179 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 GLMPQ8WWB7 406 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 HSD17B8Q92506 261 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 NPIPB3Q92617 1050 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 PIGTQ969N2 578 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 APH1AQ96BI3 265 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 PERPQ96FX8 193 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF385AQ96PM9 386 aaKnown RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 WFDC6Q9BQY6 131 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SIKE1Q9BRV8 207 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 PIMREGQ9BSJ6 248 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 NAA11Q9BSU3 229 aaPredicted RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ABHD14AQ9BUJ0 271 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SF3B5Q9BWJ5 86 aaKnown RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM38AQ9H6F2 299 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 C12orf10Q9HB07 376 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 CACYBPQ9HB71 228 aaKnown RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 DECR2Q9NUI1 292 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF701Q9NV72 531 aaPredicted RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 B3GAT1Q9P2W7 334 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 LEF1Q9UJU2 399 aaPredicted RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF580Q9UK33 172 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 PRDM4Q9UKN5 801 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SLC9A8Q9Y2E8 581 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 IFT52Q9Y366 437 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 RNF115Q9Y4L5 304 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SLC25A15Q9Y619 301 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 HEATR1Q9H583 2144 aaKnown RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 ARFGEF3Q5TH69 2177 aa3.62□□□□□ -1.83
VTI1B-203ENST00000554636 MAP1AP78559 2803 aaPredicted RBP3.62□□□□□ -1.83
VTI1B-203ENST00000554636 SETD2Q9BYW2 2564 aaPredicted RBP3.61□□□□□ -1.83
VTI1B-203ENST00000554636 A0A0B4J2E0 115 aa3.61□□□□□ -1.83
VTI1B-203ENST00000554636 A0A0G2JND7 137 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms