RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 C8orf4Q9NR00 106 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 NPAP1Q9NZP6 1156 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 CRIM1Q9NZV1 1036 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 PLEKHB1Q9UF11 243 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 ENOPH1Q9UHY7 261 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 NDRG4Q9ULP0 352 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 FKBP7Q9Y680 259 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 FLNBO75369 2602 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 A0A096LPE4 126 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 A0A1W2PPZ6 126 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC16A6O15403 523 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 PRKYO43930 277 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC16A7O60669 478 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 HMGN1P05114 100 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 CLUP10909 449 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 NR2C1P13056 603 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 CDH2P19022 906 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC2A5P22732 501 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 RAD23AP54725 363 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 KCNMB1Q16558 191 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 ZIK1Q3SY52 487 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 KLHL24Q6TFL4 600 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 ZNF813Q6ZN06 617 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 JAZF1Q86VZ6 243 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 SKA3Q8IX90 412 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 GALNT4Q8N4A0 578 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC22A24Q8N4F4 322 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 NSMAFQ92636 917 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 DACH2Q96NX9 599 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 USB1Q9BQ65 265 aaKnown RBP12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 MED20Q9H944 212 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 POLE4Q9NR33 117 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 COA3Q9Y2R0 106 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 ABCA4P78363 2273 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 CADP27708 2225 aa12.97□□□□□ -0.33
MTHFD1-204ENST00000553405 CIB4A0PJX0 185 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 SH3D21A4FU49 640 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 TUBAL3A6NHL2 446 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 FAM183AA6NL82 134 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 RIIAD1A6NNX1 92 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 KHDRBS3O75525 346 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 GPANK1O95872 356 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 RENP00797 406 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 TFP02787 698 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 MMP7P09237 267 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 PSKH1P11801 424 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 SPI1P17947 270 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 GGT2P36268 569 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 PEX19P40855 299 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 ENDOGQ14249 297 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 C1QTNF12Q5T7M4 302 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 FAM27BQ5VT28 67 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 SP5Q6BEB4 398 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 UGT2A3Q6UWM9 527 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 MEX3BQ6ZN04 569 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 BBS1Q8NFJ9 593 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC26A10Q8NG04 563 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 OR9Q1Q8NGQ5 310 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 HSD17B8Q92506 261 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 SIAEQ9HAT2 523 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 SRA1Q9HD15 236 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 FAM118AQ9NWS6 357 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 MRPL22Q9NWU5 206 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 SMPD3Q9NY59 655 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 CRNNQ9UBG3 495 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-204ENST00000553405 A0A1W2PR80 420 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 FAM221AA4D161 298 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 DEFB108AA8MXU0 73 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 MPZL1O95297 269 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 IFNGP01579 166 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 HLA-HP01893 362 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 GYPBP06028 91 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 EPXP11678 715 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 ZNF3P17036 446 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 GABRB1P18505 474 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 CRYGSP22914 178 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 LAP3P28838 519 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 CRABP1P29762 137 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 PYCR1P32322 319 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 KIR2DL3P43628 341 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 ZNF84P51523 738 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 TUBA1BP68363 451 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 TUBA4AP68366 448 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 ADARB1P78563 741 aaKnown RBP12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 DAZAP2Q15038 168 aaPredicted RBP12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 SNAPC1Q16533 368 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 AADACL4Q5VUY2 407 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 OTPQ5XKR4 325 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 HIST2H2BCQ6DN03 193 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 LYPD4Q6UWN0 246 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 TUBA1AQ71U36 451 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 CPOQ8IVL8 374 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 GLB1L2Q8IW92 636 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 ZNF295-AS1Q8N0V1 137 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 OR52N5Q8NH56 324 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 FAM222BQ8WU58 562 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 UBE2FQ969M7 185 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 FBXO17Q96EF6 278 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms