RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TMEM179Q6ZVK1 233 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 APRG1Q8IVJ8 170 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 OR5K2Q8NHB8 316 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 LINC01006Q8NI28 216 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 MCOLN3Q8TDD5 553 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 GEMIN6Q8WXD5 167 aaKnown RBP3.54□□□□□ -1.84
SCFD1-209ENST00000553280 P2RX4Q99571 388 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 ECSITQ9BQ95 431 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 UCK2Q9BZX2 261 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 RPF2Q9H7B2 306 aaKnown RBP3.54□□□□□ -1.84
SCFD1-209ENST00000553280 RETNQ9HD89 108 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 COL2A1P02458 1487 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-209ENST00000553280 CEMIPQ8WUJ3 1361 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 MAPK8IP3Q9UPT6 1336 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 GABRR3A8MPY1 467 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 LYRM9A8MSI8 78 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 ZNF701M0R085 212 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 PEX7O00628 323 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 SCAMP2O15127 329 aaKnown RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 EMC8O43402 210 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 FCN3O75636 299 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 GIPP09681 153 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 SMIM10L1P0DMW3 83 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 CTRB1P17538 263 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 FUT3P21217 361 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 GPX4P36969 197 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 CAV2P51636 162 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 NUTF2P61970 127 aaKnown RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 NCF4Q15080 339 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 SGCAQ16586 387 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 FHL5Q5TD97 284 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 FRMPD2BQ6IN97 320 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 H2AFVQ71UI9 128 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 NPBQ8NG41 125 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 OR56A4Q8NGH8 313 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 LRRC58Q96CX6 371 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 ECHDC3Q96DC8 303 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 AURKBQ96GD4 344 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 SMIM10Q96HG1 83 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 DNAJC1Q96KC8 554 aaKnown RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 C9orf72Q96LT7 481 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 SERPINB12Q96P63 405 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 OR5B12Q96R08 314 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 YTHDF1Q9BYJ9 559 aaKnown RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 IL22Q9GZX6 179 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 CLMPQ9H6B4 373 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 IL17CQ9P0M4 197 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 STOX2Q9P2F5 926 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 MYEF2Q9P2K5 600 aaKnown RBP3.53□□□□□ -1.84
SCFD1-209ENST00000553280 SAR1BQ9Y6B6 198 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 KIF25-AS1Q9Y6Z4 181 aa3.53□□□□□ -1.84
SCFD1-209ENST00000553280 A0A1W2PRD5 423 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 GJE1A6NN92 205 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 H7C0C1 242 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 XKRYO14609 159 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 BCKDKO14874 412 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 HAT1O14929 419 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 DPM1O60762 260 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 SRP72O76094 671 aaKnown RBP3.52□□□□□ -1.85
SCFD1-209ENST00000553280 UTS2O95399 124 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 AIFM1O95831 613 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 IGKV3-15P01624 115 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 IFNW1P05000 195 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 CLTAP09496 248 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 CRISP2P16562 243 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 CTRLP40313 264 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 SH3BGRP55822 239 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-209ENST00000553280 GNB2P62879 340 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 REG3AQ06141 175 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 ZNF630Q2M218 657 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-209ENST00000553280 COA6Q5JTJ3 125 aaKnown RBP3.52□□□□□ -1.85
SCFD1-209ENST00000553280 CCNJQ5T5M9 372 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 ACP7Q6ZNF0 438 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 COX15Q7KZN9 410 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 VTCN1Q7Z7D3 282 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 TMEM150AQ86TG1 271 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 LINC00523Q86TU6 105 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 SUMF2Q8NBJ7 301 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 OR2L5Q8NG80 312 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 NUBPLQ8TB37 319 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 KIAA1143Q96AT1 154 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-209ENST00000553280 SLC35E1Q96K37 410 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 GABARAPL3Q9BY60 117 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 MMP26Q9NRE1 261 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 CTPS2Q9NRF8 586 aa3.52□□□□□ -1.85
SCFD1-209ENST00000553280 NEURL4Q96JN8 1562 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 UBN2Q6ZU65 1347 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CENPJQ9HC77 1338 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-209ENST00000553280 RAI1Q7Z5J4 1906 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-209ENST00000553280 TMEM120BA0PK00 339 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 SERPINE3A8MV23 424 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 HIDE1A8MVS5 230 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 FAM25EA8MYX2 175 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 H0YHG0 523 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 SMKR1H3BMG3 65 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 ZBTB5O15062 677 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 KLF8O95600 359 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-209ENST00000553280 SNAI1O95863 264 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms