RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 MRPS18BQ9Y676 258 aaKnown RBP8.75□□□□□ -1.01
TMEM116-216ENST00000552800 CNOT1A5YKK6 2376 aaKnown RBP8.75□□□□□ -1.01
TMEM116-216ENST00000552800 NCKAP5O14513 1909 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 IGKV3D-15A0A087WSY6 115 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 A0A0J9YW62 118 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 TRBV5-5A0A0J9YX44 114 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 LOC100506127A0A0U1RQW1 187 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 KRTAP9-6A0A140TA67 174 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 PNMA8CA0A1B0GUJ8 204 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 VGLL3A8MV65 326 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 NPIPA5E9PKD4 350 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 C11orf98E9PRG8 122 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 H3BML4 177 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 KLRC4-KLRK1H3BQV0 150 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 J3QLW9 94 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 TLX3O43711 291 aaPredicted RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 SLC16A7O60669 478 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 SRSF10O75494 262 aaKnown RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 WDPCPO95876 746 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 IGHG1P01857 330 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 ISG15P05161 165 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 ZNF19P17023 458 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 PYCR1P32322 319 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 TGFBR1P36897 503 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 PEX19P40855 299 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 OPRL1P41146 370 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 CLDN15P56746 228 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 RPS3AP61247 264 aaKnown RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 LSM6P62312 80 aaKnown RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 RIN1Q13671 783 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 RIPPLY2Q5TAB7 128 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 AGAP7PQ5VUJ5 663 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 LIPNQ5VXI9 398 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 TMEM225Q6GV28 225 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 SLC18B1Q6NT16 456 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 KCTD18Q6PI47 426 aaPredicted RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 POMZP3Q6PJE2 187 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 METAP1DQ6UB28 335 aaPredicted RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 IGFL3Q6UXB1 125 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 GLB1L2Q8IW92 636 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 SULF2Q8IWU5 870 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 FAM83FQ8NEG4 500 aaPredicted RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 OR51L1Q8NGJ5 315 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 ST7LQ8TDW4 575 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 RNF128Q8TEB7 428 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 ACOT12Q8WYK0 555 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 TXNDC15Q96J42 360 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 AGAP4Q96P64 663 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 SIGLEC12Q96PQ1 595 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 OR5B2Q96R09 309 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 TM9SF2Q99805 663 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 TTYH2Q9BSA4 534 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 RNF167Q9H6Y7 350 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 ZNF703Q9H7S9 590 aaPredicted RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 CYB5R1Q9UHQ9 305 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 FOXD3Q9UJU5 478 aaPredicted RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 NPIPA1Q9UND3 350 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 ZNF281Q9Y2X9 895 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 KLF13Q9Y2Y9 288 aaPredicted RBP8.74□□□□□ -1.01
TMEM116-216ENST00000552800 CFAP54Q96N23 3096 aa8.74□□□□□ -1.01
TMEM116-216ENST00000552800 FAM186AA6NE01 2351 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 MUC6Q6W4X9 2439 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 NCOA6Q14686 2063 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-216ENST00000552800 SHISA3A0PJX4 238 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 PINLYPA6NC86 204 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 OR4C45A6NMZ5 311 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ZNF716A6NP11 495 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 PRR32B1ATL7 298 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ZNF814B7Z6K7 855 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 SHISA8B8ZZ34 492 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 MASP2O00187 686 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ZNF593O00488 134 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-216ENST00000552800 GMFGO60234 142 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 CYTIPO60759 359 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 TPPPO94811 219 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ACTL6AO96019 429 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 RFPL3SP0C7P2 107 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ZNF12P17014 697 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ZNF43P17038 809 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 SDHBP21912 280 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 APEX1P27695 318 aaKnown RBP8.73□□□□□ -1.01
TMEM116-216ENST00000552800 LAP3P28838 519 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 SDC2P34741 201 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 MAP2K3P46734 347 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 CD97P48960 835 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 DNASE1L1P49184 302 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 HCCSP53701 268 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 OR2B6P58173 313 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 HIST1H3AP68431 136 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 POU3F1Q03052 451 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ALKBH1Q13686 389 aaKnown RBP8.73□□□□□ -1.01
TMEM116-216ENST00000552800 OR1C1Q15619 314 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 NRN1LQ496H8 165 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ACSM3Q53FZ2 586 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 HIST2H3PS2Q5TEC6 136 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ABLIM2Q6H8Q1 611 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 C22orf42Q6IC83 251 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 SPINK14Q6IE38 97 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 LRFN4Q6PJG9 635 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms