RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 FREM3P0C091 2139 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 HMX3A6NHT5 357 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 EEF1E1O43324 174 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 ADRA2CP18825 462 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 DPP4P27487 766 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 MMP15P51511 669 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 FMODQ06828 376 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 C19orf57Q0VDD7 668 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 ZNF528Q3MIS6 628 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 PRAMEF20Q5VT98 475 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 RSBN1Q5VWQ0 802 aaPredicted RBP12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 KRT77Q7Z794 578 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 GLCCI1Q86VQ1 547 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 CMTM4Q8IZR5 234 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 OR11G2Q8NGC1 345 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 AKAP7Q9P0M2 348 aaPredicted RBP12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 B3GAT1Q9P2W7 334 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 NLKQ9UBE8 527 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 RPH3AQ9Y2J0 694 aaPredicted RBP12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 MUC3AQ02505 3323 aa12.55□□□□□ -0.4
RAB3IP-216ENST00000552199 TRABD2BA6NFA1 517 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 KHDRBS3O75525 346 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 PNPP00491 289 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 OPN1LWP04000 364 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 TRAPPC2P0DI81 140 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 TRAPPC2BP0DI82 140 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 ZNF823P16415 610 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 ADH6P28332 368 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 EIF1P41567 113 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 RIDAP52758 137 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 BIDP55957 195 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 GPR176Q14439 515 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 PCK2Q16822 640 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 ODF4Q2M2E3 257 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 ESPNLQ6ZVH7 1005 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 ASB18Q6ZVZ8 466 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 NDUFAF7Q7L592 441 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 OR51A4Q8NGJ6 313 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 OR6F1Q8NGZ6 308 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 OR52N5Q8NH56 324 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 THRSPQ92748 146 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 MRI1Q9BV20 369 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 CDCP1Q9H5V8 836 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 KLHL13Q9P2N7 655 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 ARPC4-TTLL3A0A0A6YYG9 625 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 NSG1A0A0A6YYJ2 146 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 IGKV1D-43A0A0B4J1Z2 117 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 A0A0B4J293 547 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 IGHEP01854 428 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 SSR4P51571 173 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 P2RY4P51582 365 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 CLDN20P56880 219 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 DCAF12Q5T6F0 453 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 FCRLAQ7L513 359 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 PLCZ1Q86YW0 608 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 MCHR2Q969V1 340 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 TMEM106AQ96A25 262 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 OR5B2Q96R09 309 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 ANGPTL4Q9BY76 406 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 TMEM185BQ9H7F4 350 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 LIN7BQ9HAP6 207 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 ZNF160Q9HCG1 818 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 RABL2AQ9UBK7 228 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 RABL2BQ9UNT1 228 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 SLC22A13Q9Y226 551 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 MRPS7Q9Y2R9 242 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 LRP12Q9Y561 859 aa12.54□□□□□ -0.4
RAB3IP-216ENST00000552199 CACNA1CQ13936 2221 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 TRAV8-7A0A075B6U6 113 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 A0A087WZY1 265 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 A0A1W2PQ72 361 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 CTDSPLO15194 276 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 GSTZ1O43708 216 aaPredicted RBP12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 AQP8O94778 261 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 WNT11O96014 354 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 CALCBP10092 127 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 FKBP2P26885 142 aaKnown RBP12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 SLC36A2Q495M3 483 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 OR7E24Q6IFN5 339 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 MDGA2Q7Z553 956 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 CATSPERDQ86XM0 798 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 UEVLDQ8IX04 471 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 YIPF5Q969M3 257 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 ZBTB8AQ96BR9 441 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 NTNG2Q96CW9 530 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 SLC25A38Q96DW6 304 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 ZFP3Q96NJ6 502 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 MARVELD1Q9BSK0 173 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 EMC6Q9BV81 110 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 MRPL13Q9BYD1 178 aaKnown RBP12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 OR5V1Q9UGF6 321 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 HDGFL3Q9Y3E1 203 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 LOXL2Q9Y4K0 774 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 VPS13AQ96RL7 3174 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 NCOR1O75376 2440 aa12.53□□□□□ -0.4
RAB3IP-216ENST00000552199 STK17BO94768 372 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 HRGP04196 525 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms