RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 KRR1Q13601 381 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 FLOT2Q14254 428 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 ETFDHQ16134 617 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 TMEM53Q6P2H8 277 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 PGBD2Q6P3X8 592 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 FOXL2NBQ6ZUU3 175 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 ADCK1Q86TW2 530 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 ADGRG5Q8IZF4 528 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 GNPDA2Q8TDQ7 276 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 NSMAFQ92636 917 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 NABP1Q96AH0 204 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 SH3GL3Q99963 347 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 OR52D1Q9H346 318 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 C1orf198Q9H425 327 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 ZNF442Q9H7R0 627 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 REEP1Q9H902 201 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 DLL4Q9NR61 685 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 CA10Q9NS85 328 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 ZNF469Q96JG9 3925 aaPredicted RBP13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 TEX13CA0A0J9YWL9 993 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 DHRS12A0PJE2 317 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 SLC22A23A1A5C7 686 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 PRSS37A4D1T9 235 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 SERPINA5P05154 406 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 BMP4P12644 408 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 CDKN1AP38936 164 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 HGFACQ04756 655 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 PIGFQ07326 219 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 RFX4Q33E94 735 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 OR2T5Q6IEZ7 315 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 RPL13AP3Q6NVV1 102 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 YTHDF3Q7Z739 585 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 CLDN22Q8N7P3 220 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 OR2T29Q8NH02 315 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 FGFBP3Q8TAT2 258 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 KCNN2Q9H2S1 579 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 SAMHD1Q9Y3Z3 626 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 NF1P21359 2839 aa13.36□□□□□ -0.27
PRPF40B-211ENST00000551063 VSTM5A8MXK1 200 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 H7C1C5 153 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 IMPA2O14732 288 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 ARPC3O15145 178 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 GSC2O15499 205 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 CCNB2O95067 398 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 MMP7P09237 267 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 PATE4P0C8F1 98 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 CDAP32320 146 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 LCN6P62502 163 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 RAB39AQ14964 217 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 FAM27BQ5VT28 67 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 ZNF770Q6IQ21 691 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 ZNF620Q6ZNG0 422 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 ZNF584Q8IVC4 421 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 OR9Q2Q8NGE9 314 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 HTRA1Q92743 480 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 RASD2Q96D21 266 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 SNX18Q96RF0 628 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 CHID1Q9BWS9 393 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 CACNG6Q9BXT2 260 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 CADM1Q9BY67 442 aaKnown RBP13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 RNF121Q9H920 327 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 BARX1Q9HBU1 254 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 VSX1Q9NZR4 365 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 IL20RAQ9UHF4 553 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 POMPQ9Y244 141 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 IER3IP1Q9Y5U9 82 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 CDH10Q9Y6N8 788 aa13.35□□□□□ -0.27
PRPF40B-211ENST00000551063 VPS13CQ709C8 3753 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 B9A039 149 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 H7C417 338 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 PPP1R3DO95685 299 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 PTHP01270 115 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 CST2P09228 141 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 ZNF35P13682 527 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 HOXB4P17483 251 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 MSR1P21757 451 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 SERPINF1P36955 418 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 PLP2Q04941 152 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 SNTB2Q13425 540 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 DAG1Q14118 895 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 EFNB3Q15768 340 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 ADIPOQQ15848 244 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 SWI5Q1ZZU3 235 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 BIVMQ86UB2 503 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 SPATA24Q86W54 205 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 CANT1Q8WVQ1 401 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 C18orf12Q96KH6 178 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 WACQ9BTA9 647 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 SYT4Q9H2B2 425 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 MMADHCQ9H3L0 296 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 GSX1Q9H4S2 264 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 CCNB1IP1Q9NPC3 277 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 VNN3Q9NY84 501 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 SLC7A8Q9UHI5 535 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 FBXO9Q9UK97 447 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 SPEF1Q9Y4P9 236 aa13.34□□□□□ -0.27
PRPF40B-211ENST00000551063 IQCMA0A1B0GVH7 501 aa13.33□□□□□ -0.28
PRPF40B-211ENST00000551063 A0A1W2PPL8 197 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms