RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 IGFBP5P24593 272 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 DDOSTP39656 456 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 CRATP43155 626 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 KCNJ3P48549 501 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 GP2P55259 537 aaKnown RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 RAB39AQ14964 217 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PTGES3Q15185 160 aaKnown RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 RAB35Q15286 201 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 OR5M10Q6IEU7 315 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SLC25A25Q6KCM7 469 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PAPD4Q6PIY7 484 aaKnown RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ASCL5Q7RTU5 278 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 LRRTM1Q86UE6 522 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 CCDC190Q86UF4 302 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 CLIP4Q8N3C7 705 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 RBMXL3Q8N7X1 1067 aaKnown RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 OR51T1Q8NGJ9 327 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ASB5Q8WWX0 329 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 GGHQ92820 318 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 TSPAN32Q96QS1 320 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 OR8B4Q96RC9 309 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ATP6V0BQ99437 205 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 FOXB1Q99853 325 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SLC6A7Q99884 636 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 RIBC2Q9H4K1 309 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 LIN28AQ9H9Z2 209 aaKnown RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 FBXL4Q9UKA2 621 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 A0A0B4J2A0 478 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PRSS37A4D1T9 235 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM210A6NLX4 147 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ICOSLGO75144 302 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ANGPTL1O95841 491 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SERPINA3P01011 423 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 LIMS3P0CW19 117 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 LIMS4P0CW20 117 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SAGP10523 405 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF14P17017 642 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SOX6P35712 828 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 CD200P41217 278 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PRR20EP86478 221 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PRR20CP86479 221 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PRR20DP86480 221 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PRR20BP86481 221 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PRR20AP86496 221 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 RASGEF1BQ0VAM2 473 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ESCO2Q56NI9 601 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SFRP5Q5T4F7 317 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 C1orf140Q5VVS0 124 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM211Q6ICI0 200 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ICA1LQ8NDH6 482 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 OR52I1Q8NGK6 324 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 OTOSQ8NHW6 89 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 UCN3Q969E3 161 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 DACT3Q96B18 629 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 OPALINQ96PE5 141 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SLC22A4Q9H015 551 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ALX4Q9H161 411 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ABRACLQ9P1F3 81 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SHPKQ9UHJ6 478 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PLAGL1Q9UM63 463 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 TRBV4-1A0A0J9YWV2 114 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 GXYLT2A0PJZ3 443 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 PDZK1P1A8MUH7 402 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 A8MXE2 369 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 B4DGG1 531 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 KLRC4-KLRK1H3BQV0 150 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 RAB27BO00194 218 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 CST1P01037 141 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF35P13682 527 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 IFNA8P32881 189 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 MTPNP58546 118 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 UBE2MP61081 183 aaKnown RBP4.29□□□□□ -1.72
SCAF11-212ENST00000549162 EIF4EBP1Q13541 118 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-212ENST00000549162 RAB32Q13637 225 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 ENDOGQ14249 297 aaKnown RBP4.29□□□□□ -1.72
SCAF11-212ENST00000549162 SLC10A1Q14973 349 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 MESTQ5EB52 335 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 ACER2Q5QJU3 275 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 CYP2R1Q6VVX0 501 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 CYP4Z2PQ8N1L4 340 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 KIR3DL3Q8N743 410 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 CORO2AQ92828 525 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 BCL2L2Q92843 193 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-212ENST00000549162 APOBEC3DQ96AK3 386 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-212ENST00000549162 SMIM19Q96E16 107 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 LDAHQ9H6V9 325 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 PLA2G3Q9NZ20 509 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 USP22Q9UPT9 525 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 CA5BQ9Y2D0 317 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-212ENST00000549162 E9PLN8 166 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 TRMUO75648 421 aaKnown RBP4.29□□□□□ -1.72
SCAF11-212ENST00000549162 SEC24DO94855 1032 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-212ENST00000549162 ERP29P30040 261 aaKnown RBP4.29□□□□□ -1.72
SCAF11-212ENST00000549162 THBS4P35443 961 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 PSMB10P40306 273 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 ARHGDIAP52565 204 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 ERVK11-1P61568 191 aa4.29□□□□□ -1.72
SCAF11-212ENST00000549162 CD47Q08722 323 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms