RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 DUSP13Q9UII6 198 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 IGLV3-9A0A075B6K5 115 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 TRAV27A0A087WT01 109 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 CXCR6O00574 342 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 FFAR1O14842 300 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 MGRN1O60291 552 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 PRSS23O95084 383 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 TGFAP01135 160 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 IFNW1P05000 195 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 SRD5A1P18405 259 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 MRPS34P82930 218 aaKnown RBP18.09■□□□□ 0.49
SCARB1-210ENST00000545493 CD47Q08722 323 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 FHL1Q13642 323 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 CBLL1Q75N03 491 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 LZICQ8WZA0 190 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 HPS1Q92902 700 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 YIPF5Q969M3 257 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 SIAEQ9HAT2 523 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 AP3M1Q9Y2T2 418 aa18.09■□□□□ 0.49
SCARB1-210ENST00000545493 SLC22A23A1A5C7 686 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 ZNF32P17041 273 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 CCNIQ14094 377 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 PABPC1L2AQ5JQF8 200 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 SLC25A47Q6Q0C1 308 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 CPEB3Q8NE35 698 aaKnown RBP18.08■□□□□ 0.48
SCARB1-210ENST00000545493 ZNF519Q8TB69 540 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 GEMIN6Q8WXD5 167 aaKnown RBP18.08■□□□□ 0.48
SCARB1-210ENST00000545493 NSMAFQ92636 917 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 C1orf159Q96HA4 380 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 HSH2DQ96JZ2 352 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 ALG12Q9BV10 488 aa18.08■□□□□ 0.48
SCARB1-210ENST00000545493 ZNF346Q9UL40 294 aaKnown RBP18.08■□□□□ 0.48
SCARB1-210ENST00000545493 IQCMA0A1B0GVH7 501 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 ZNF682O95780 498 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 LCKP06239 509 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 SAGP10523 405 aaPredicted RBP18.07■□□□□ 0.48
SCARB1-210ENST00000545493 ZNF250P15622 560 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 ACHEP22303 614 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 COL8A2P25067 703 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 MDH1P40925 334 aaKnown RBP18.07■□□□□ 0.48
SCARB1-210ENST00000545493 MAGEB1P43366 347 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 GSK3BP49841 420 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 CDH15P55291 814 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 KLF3P57682 345 aaPredicted RBP18.07■□□□□ 0.48
SCARB1-210ENST00000545493 RPL27P61353 136 aaKnown RBP18.07■□□□□ 0.48
SCARB1-210ENST00000545493 HSF2Q03933 536 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 TAF11Q15544 211 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 NKPD1Q17RQ9 610 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 CR1LQ2VPA4 569 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 OR13C2Q8NGS9 318 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 TAAR3PQ9P1P4 343 aa18.07■□□□□ 0.48
SCARB1-210ENST00000545493 RP2O75695 350 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 SERPINA1P01009 418 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 PTHP01270 115 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 NR2C1P13056 603 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 IFNA8P32881 189 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 APLNRP35414 380 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 WNT5AP41221 380 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 GPR6P46095 362 aaPredicted RBP18.06■□□□□ 0.48
SCARB1-210ENST00000545493 UCP2P55851 309 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 CTXN1P60606 82 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 PRKCDQ05655 676 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 TRAM2Q15035 370 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 IFI44LQ53G44 452 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 HSP90B2PQ58FF3 399 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 TMEM255AQ5JRV8 349 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 FOXL2NBQ6ZUU3 175 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 TSEN54Q7Z6J9 526 aaKnown RBP18.06■□□□□ 0.48
SCARB1-210ENST00000545493 LINC01356Q8N9X3 169 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 OR1J2Q8NGS2 313 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 OR51A7Q8NH64 312 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 AKR7LQ8NHP1 331 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 SYNPRQ8TBG9 265 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 GTF3AQ92664 365 aaKnown RBP18.06■□□□□ 0.48
SCARB1-210ENST00000545493 RDH5Q92781 318 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 FNDC11Q9BVV2 318 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 BCL2L14Q9BZR8 327 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 MED4Q9NPJ6 270 aa18.06■□□□□ 0.48
SCARB1-210ENST00000545493 ZNF275Q9NSD4 429 aaPredicted RBP18.06■□□□□ 0.48
SCARB1-210ENST00000545493 A0A087WUU8 490 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 HTR3EA5X5Y0 456 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 GMNCA6NCL1 334 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 C17orf100A8MU93 164 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 CDC42EP2O14613 210 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 HNF1AP20823 631 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 GPR4P46093 362 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 NUDT2P50583 147 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 ERVK-25P63136 954 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 SRSF2Q01130 221 aaKnown RBP18.05■□□□□ 0.48
SCARB1-210ENST00000545493 GLO1Q04760 184 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 PLP2Q04941 152 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 KRTAP24-1Q3LI83 254 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 HACD2Q6Y1H2 254 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 ZNF101Q8IZC7 436 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 ICA1LQ8NDH6 482 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 CLDND2Q8NHS1 167 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 ACOT11Q8WXI4 607 aaPredicted RBP18.05■□□□□ 0.48
SCARB1-210ENST00000545493 TMEM158Q8WZ71 300 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 POM121L2Q96KW2 1035 aa18.05■□□□□ 0.48
SCARB1-210ENST00000545493 HOPXQ9BPY8 73 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms