RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CLN6Q9NWW5 311 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 NCOA6Q14686 2063 aaPredicted RBP20.31■□□□□ 0.84
HOMER3-205ENST00000542541 FREM1Q5H8C1 2179 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 A0A1W2PPL8 197 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 GYPBP06028 91 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 PSMB1P20618 241 aaKnown RBP20.31■□□□□ 0.84
HOMER3-205ENST00000542541 FOXG1P55316 489 aaPredicted RBP20.31■□□□□ 0.84
HOMER3-205ENST00000542541 ISL1P61371 349 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 RPS7P62081 194 aaKnown RBP20.31■□□□□ 0.84
HOMER3-205ENST00000542541 ANKRD16Q6P6B7 361 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 ZNF627Q7L945 461 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 THAP5Q7Z6K1 395 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 C1orf162Q8NEQ5 155 aaPredicted RBP20.31■□□□□ 0.84
HOMER3-205ENST00000542541 USB1Q9BQ65 265 aaKnown RBP20.31■□□□□ 0.84
HOMER3-205ENST00000542541 ANKRD60Q9BZ19 345 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 TMEM38BQ9NVV0 291 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 GALNT8Q9NY28 637 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 UGT2A1Q9Y4X1 527 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 MYO18BQ8IUG5 2567 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 TENM4Q6N022 2769 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 WIPF3A6NGB9 483 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 LYZL6O75951 148 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 GLCEO94923 617 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 FARS2O95363 451 aaKnown RBP20.3■□□□□ 0.84
HOMER3-205ENST00000542541 CLUP10909 449 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 IL32P24001 234 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 FMO3P31513 532 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 PYCR1P32322 319 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 MAD2L1BPQ15013 274 aaPredicted RBP20.3■□□□□ 0.84
HOMER3-205ENST00000542541 STAC2Q6ZMT1 411 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 ZNF813Q6ZN06 617 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 OR51L1Q8NGJ5 315 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 OR1K1Q8NGR3 316 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 OR6K6Q8NGW6 343 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 RNASE6Q93091 150 aaKnown RBP20.3■□□□□ 0.84
HOMER3-205ENST00000542541 SIAEQ9HAT2 523 aa20.3■□□□□ 0.84
HOMER3-205ENST00000542541 NKX2-6A6NCS4 301 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 SLC22A31A6NKX4 558 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 C16orf97H3BN30 126 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 HLA-DQA2P01906 255 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 OR8G3PP0DMU2 310 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 GABRB1P18505 474 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 HSF2Q03933 536 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 FAM27E3Q08E93 113 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 APOFQ13790 326 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 SGCAQ16586 387 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 LCN1P1Q5VSP4 162 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 FOXL2NBQ6ZUU3 175 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 MEPCEQ7L2J0 689 aaKnown RBP20.29■□□□□ 0.84
HOMER3-205ENST00000542541 BHLHA15Q7RTS1 189 aaPredicted RBP20.29■□□□□ 0.84
HOMER3-205ENST00000542541 BBS1Q8NFJ9 593 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 STEAP2Q8NFT2 490 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 BOD1Q96IK1 185 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 ZNF582Q96NG8 517 aaPredicted RBP20.29■□□□□ 0.84
HOMER3-205ENST00000542541 TEAD3Q99594 435 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 NELFAQ9H3P2 528 aa20.29■□□□□ 0.84
HOMER3-205ENST00000542541 HELZ2Q9BYK8 2649 aaKnown RBP20.29■□□□□ 0.84
HOMER3-205ENST00000542541 FAM171A2A8MVW0 826 aa20.28■□□□□ 0.84
HOMER3-205ENST00000542541 RAD51DO75771 328 aa20.28■□□□□ 0.84
HOMER3-205ENST00000542541 SLC2A5P22732 501 aa20.28■□□□□ 0.84
HOMER3-205ENST00000542541 MYF6P23409 242 aa20.28■□□□□ 0.84
HOMER3-205ENST00000542541 CDAP32320 146 aa20.28■□□□□ 0.84
HOMER3-205ENST00000542541 TMED1Q13445 227 aa20.28■□□□□ 0.84
HOMER3-205ENST00000542541 CDSNQ15517 529 aa20.28■□□□□ 0.84
HOMER3-205ENST00000542541 BCDIN3DQ7Z5W3 292 aaKnown RBP20.28■□□□□ 0.84
HOMER3-205ENST00000542541 C17orf78Q8N4C9 275 aa20.28■□□□□ 0.84
HOMER3-205ENST00000542541 DNAJC27Q9NZQ0 273 aa20.28■□□□□ 0.84
HOMER3-205ENST00000542541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.28■□□□□ 0.84
HOMER3-205ENST00000542541 HRGP04196 525 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 HOXB1P14653 301 aaPredicted RBP20.27■□□□□ 0.84
HOMER3-205ENST00000542541 B4GALT1P15291 398 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 MSR1P21757 451 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 HOXC12P31275 282 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 CDH11P55287 796 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 TEKQ02763 1124 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 GABRA6Q16445 453 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 FAM27BQ5VT28 67 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 CCDC36Q8IYA8 594 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 SLC22A24Q8N4F4 322 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 BCL2L2Q92843 193 aaPredicted RBP20.27■□□□□ 0.84
HOMER3-205ENST00000542541 OR10A4Q9H209 315 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 KCNN2Q9H2S1 579 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 POLE4Q9NR33 117 aa20.27■□□□□ 0.84
HOMER3-205ENST00000542541 WARS2Q9UGM6 360 aaKnown RBP20.27■□□□□ 0.84
HOMER3-205ENST00000542541 DENRO43583 198 aaKnown RBP20.27■□□□□ 0.83
HOMER3-205ENST00000542541 ENTPD6O75354 484 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 GSTT1P30711 240 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 HTR1FP30939 366 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 UGT2B10P36537 528 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 DBPQ10586 325 aaPredicted RBP20.27■□□□□ 0.83
HOMER3-205ENST00000542541 KCNMB1Q16558 191 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 C1QTNF12Q5T7M4 302 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 LINC01590Q5TEZ4 76 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 P2RY8Q86VZ1 359 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 SLC26A10Q8NG04 563 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 OR10H5Q8NGA6 315 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 SSC4DQ8WTU2 575 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 ZNRF4Q8WWF5 429 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 FOXN4Q96NZ1 517 aa20.27■□□□□ 0.83
HOMER3-205ENST00000542541 SH3D21A4FU49 640 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms