RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CEACAM6P40199 344 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 MAGEA8P43361 318 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 MAB21L1Q13394 359 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 CLINT1Q14677 625 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 SMUG1Q53HV7 270 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 THEM4Q5T1C6 240 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 PRMT9Q6P2P2 845 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 LHFPL3Q86UP9 236 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 GATSQ8NAP1 163 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 COQ8AQ8NI60 647 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 TMEM54Q969K7 222 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 COQ2Q96H96 371 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 PANX2Q96RD6 677 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 CAMK2N2Q96S95 79 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 SH3GL1Q99961 368 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 ZSCAN5AQ9BUG6 496 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 FAIM2Q9BWQ8 316 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 DDX19AQ9NUU7 478 aaKnown RBP1.93□□□□□ -2.1
CCDC7-209ENST00000539197 ADAM28Q9UKQ2 775 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 PIGLQ9Y2B2 252 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 CDHR2Q9BYE9 1310 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 NLRC5Q86WI3 1866 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 TRAV26-1A0A087WT03 109 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 CCNKO75909 580 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 CDRT1O95170 752 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 UBTFL6P0CB48 400 aaPredicted RBP1.92□□□□□ -2.1
CCDC7-209ENST00000539197 NCK1P16333 377 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 DTYMKP23919 212 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 HRH1P35367 487 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 EPS15P42566 896 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 ZNF816Q0VGE8 651 aaPredicted RBP1.92□□□□□ -2.1
CCDC7-209ENST00000539197 IFT88Q13099 833 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 PDK3Q15120 406 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 ZSCAN26Q16670 478 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 DUX4L9Q6RFH8 374 aaPredicted RBP1.92□□□□□ -2.1
CCDC7-209ENST00000539197 TEX43Q6ZNM6 134 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 NTM-AS1Q6ZSK4 140 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 DHDDSQ86SQ9 333 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 NOXO1Q8NFA2 376 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 PLEKHA8Q96JA3 519 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 MTMR9Q96QG7 549 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 CNN2Q99439 309 aaKnown RBP1.92□□□□□ -2.1
CCDC7-209ENST00000539197 SLC39A3Q9BRY0 314 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 PSG8Q9UQ74 426 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 MRPS18BQ9Y676 258 aaKnown RBP1.92□□□□□ -2.1
CCDC7-209ENST00000539197 MYO16Q9Y6X6 1858 aa1.92□□□□□ -2.1
CCDC7-209ENST00000539197 GPATCH8Q9UKJ3 1502 aaKnown RBP1.91□□□□□ -2.1
CCDC7-209ENST00000539197 DOCK8Q8NF50 2099 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 ZNF208O43345 1280 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 GNAO1P09471 354 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 FBXW4P57775 412 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 NUTF2P61970 127 aaKnown RBP1.91□□□□□ -2.1
CCDC7-209ENST00000539197 CDC20Q12834 499 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 SRSF5Q13243 272 aaKnown RBP1.91□□□□□ -2.1
CCDC7-209ENST00000539197 RGNQ15493 299 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 IGFBP7Q16270 282 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 IMMTQ16891 758 aaKnown RBP1.91□□□□□ -2.1
CCDC7-209ENST00000539197 AP1ARQ63HQ0 302 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 SLC25A24Q6NUK1 477 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 CCDC73Q6ZRK6 1079 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 OSR2Q8N2R0 312 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 NECAP1Q8NC96 275 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 OR9A2Q8NGT5 310 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 OR2T3Q8NH03 318 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 SCFD1Q8WVM8 642 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 RTN4IP1Q8WWV3 396 aaPredicted RBP1.91□□□□□ -2.1
CCDC7-209ENST00000539197 PIK3IP1Q96FE7 263 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 RNF5Q99942 180 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 TMEM43Q9BTV4 400 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 TRIM62Q9BVG3 475 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 ZNF717Q9BY31 904 aaPredicted RBP1.91□□□□□ -2.1
CCDC7-209ENST00000539197 TMCC3Q9ULS5 477 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 IKBKGQ9Y6K9 419 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 S4R3C0 116 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 MUC6Q6W4X9 2439 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 PTPRTO14522 1441 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 YEATS2Q9ULM3 1422 aa1.91□□□□□ -2.1
CCDC7-209ENST00000539197 K7EM74 188 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 RP2O75695 350 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 UTS2O95399 124 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 CASP14P31944 242 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 VHLP40337 213 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 OPRK1P41145 380 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 CDKN1BP46527 198 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 SLC11A1P49279 550 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 TAF9Q16594 264 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 CCDC152Q4G0S7 254 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 PHYHD1Q5SRE7 291 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 CCNJQ5T5M9 372 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 ARL9Q6T311 187 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 TGIF2LXQ8IUE1 241 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 TCEANC2Q96MN5 208 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 PSKH2Q96QS6 385 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 FMO2Q99518 471 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 TCHPQ9BT92 498 aa1.9□□□□□ -2.11
CCDC7-209ENST00000539197 C15orf38-AP3S2A0A0A6YYH1 394 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 A0A1B0GVL5 298 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 F6UB75 175 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 UBXN8O00124 270 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 GOSR2O14653 212 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms