RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 FUT4P22083 530 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 USF1P22415 310 aaPredicted RBP9.96□□□□□ -0.82
RTN3-209ENST00000538995 CTXN1P60606 82 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 TBC1D28Q2M2D7 210 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 SLC25A47Q6Q0C1 308 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 FOXL2NBQ6ZUU3 175 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 ARIH2OSQ8N7S6 290 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 ANKS4BQ8N8V4 417 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 OR13C2Q8NGS9 318 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 OR51A7Q8NH64 312 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 NABP1Q96AH0 204 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 C7orf34Q96L11 122 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 DHRS1Q96LJ7 313 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 TSPAN32Q96QS1 320 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 RBP7Q96R05 134 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 MRPL37Q9BZE1 423 aaKnown RBP9.96□□□□□ -0.82
RTN3-209ENST00000538995 LRMDAQ9H2I8 198 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 RNF121Q9H920 327 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 CDH20Q9HBT6 801 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 KRCC1Q9NPI7 259 aaPredicted RBP9.96□□□□□ -0.82
RTN3-209ENST00000538995 ZNF346Q9UL40 294 aaKnown RBP9.96□□□□□ -0.82
RTN3-209ENST00000538995 IGKV1D-43A0A0B4J1Z2 117 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 CDC42EP2O14613 210 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 CRLF1O75462 422 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 CD14P08571 375 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 GIFP27352 417 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 GUCA1AP43080 201 aaPredicted RBP9.95□□□□□ -0.82
RTN3-209ENST00000538995 NR4A2P43354 598 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 GPR4P46093 362 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 LIMS1P48059 325 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 MNAT1P51948 309 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 SMIM11AP58511 58 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 HSF2Q03933 536 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 FMODQ06828 376 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 MSMPQ1L6U9 139 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 ZBED5Q49AG3 693 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 FGD3Q5JSP0 725 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 C6orf52Q5T4I8 152 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 FAM27BQ5VT28 67 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 PODNL1Q6PEZ8 512 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 C16orf89Q6UX73 402 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 GPX7Q96SL4 187 aaPredicted RBP9.95□□□□□ -0.82
RTN3-209ENST00000538995 WACQ9BTA9 647 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 BCL2L14Q9BZR8 327 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 MS4A5Q9H3V2 200 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 CCNB1IP1Q9NPC3 277 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 CD300AQ9UGN4 299 aa9.95□□□□□ -0.82
RTN3-209ENST00000538995 CR1P17927 2039 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 A8MV72 311 aaPredicted RBP9.94□□□□□ -0.82
RTN3-209ENST00000538995 XKRYO14609 159 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 NDUFB2O95178 105 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 SEMG1P04279 462 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 IGFBP1P08833 259 aaPredicted RBP9.94□□□□□ -0.82
RTN3-209ENST00000538995 ADRA2AP08913 450 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 CST2P09228 141 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 DAOP14920 347 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 CDAP32320 146 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 APLNRP35414 380 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 RPL4P36578 427 aaKnown RBP9.94□□□□□ -0.82
RTN3-209ENST00000538995 RAD52P43351 418 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 GYS2P54840 703 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 SELENOVP59797 346 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 PCBD1P61457 104 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 KRT72Q14CN4 511 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 PABPC1L2AQ5JQF8 200 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 GPR139Q6DWJ6 353 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 RGS7BPQ6MZT1 257 aaPredicted RBP9.94□□□□□ -0.82
RTN3-209ENST00000538995 TBPL2Q6SJ96 375 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 UNQ6126/PRO20091Q6UXV3 157 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 FAM122BQ7Z309 247 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 IGFN1Q86VF2 1251 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 C1orf174Q8IYL3 243 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 ZNF786Q8N393 782 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 LRRC18Q8N456 261 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 RNF148Q8N7C7 305 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 FAM86B1Q8N7N1 296 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 NSMAFQ92636 917 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 MCUR1Q96AQ8 359 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 PYURFQ96I23 114 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 FAM46AQ96IP4 442 aaKnown RBP9.94□□□□□ -0.82
RTN3-209ENST00000538995 NSMCE2Q96MF7 247 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 FUZQ9BT04 418 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 ARL8BQ9NVJ2 186 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 TMEM160Q9NX00 188 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 GRHPRQ9UBQ7 328 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 REV1Q9UBZ9 1251 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 GPR160Q9UJ42 338 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 SIGLEC7Q9Y286 467 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 RTTNQ86VV8 2226 aa9.94□□□□□ -0.82
RTN3-209ENST00000538995 IGLV3-9A0A075B6K5 115 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 TRBV4-1A0A0J9YWV2 114 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 ARPC2O15144 300 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 STAMBPO95630 424 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 IGHV4-31P0DP07 118 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 ZNF250P15622 560 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 ZNF26P17031 533 aaPredicted RBP9.93□□□□□ -0.82
RTN3-209ENST00000538995 ZNF32P17041 273 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 TCN1P20061 433 aaPredicted RBP9.93□□□□□ -0.82
RTN3-209ENST00000538995 MSR1P21757 451 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 SDHAP31040 664 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms