RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 TRIP10Q15642 601 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 MSMPQ1L6U9 139 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 KRTAP24-1Q3LI83 254 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 CYBRD1Q53TN4 286 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 FAM205BPQ63HN1 556 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 ARPINQ7Z6K5 226 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 LRP11Q86VZ4 500 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 NKAIN4Q8IVV8 208 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 C1orf174Q8IYL3 243 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 TEX29Q8N6K0 151 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 OR2T12Q8NG77 320 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 FGFBP3Q8TAT2 258 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 C10orf82Q8WW14 230 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 SOX7Q9BT81 388 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 C19orf24Q9BVV8 132 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 NKIRAS2Q9NYR9 191 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 MYEF2Q9P2K5 600 aaKnown RBP11.25□□□□□ -0.61
RTN3-207ENST00000536011 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 C17orf100A8MU93 164 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 PPIHO43447 177 aaKnown RBP11.24□□□□□ -0.61
RTN3-207ENST00000536011 TCF21O43680 179 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 TRMUO75648 421 aaKnown RBP11.24□□□□□ -0.61
RTN3-207ENST00000536011 TNFRSF1BP20333 461 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 KDELR2P33947 212 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 OR1E2P47887 323 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 SEC24CP53992 1094 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 MYBPC1Q00872 1141 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 ANKDD1AQ495B1 522 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 ALG10Q5BKT4 473 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 FAM209AQ5JX71 171 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 ARMC4Q5T2S8 1044 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 LRRC18Q8N456 261 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 ICA1LQ8NDH6 482 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 OR51F2Q8NH61 342 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 TPD52L3Q96J77 140 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 ZNF583Q96ND8 569 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 ALG12Q9BV10 488 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 NDEL1Q9GZM8 345 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 TXNIPQ9H3M7 391 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 SAR1AQ9NR31 198 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 ZNF275Q9NSD4 429 aaPredicted RBP11.24□□□□□ -0.61
RTN3-207ENST00000536011 C20orf141Q9NUB4 165 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 FGFR1OP2Q9NVK5 253 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 EIF3KQ9UBQ5 218 aaKnown RBP11.24□□□□□ -0.61
RTN3-207ENST00000536011 HIF3AQ9Y2N7 669 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 GRIP1Q9Y3R0 1128 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 CAPN7Q9Y6W3 813 aa11.24□□□□□ -0.61
RTN3-207ENST00000536011 PLSCR5A0PG75 271 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 ELOVL7A1L3X0 281 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 A6NIZ1 184 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 SHOX2O60902 331 aaPredicted RBP11.23□□□□□ -0.61
RTN3-207ENST00000536011 SLC2A10O95528 541 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 IFNW1P05000 195 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 MSMBP08118 114 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 MMP7P09237 267 aaPredicted RBP11.23□□□□□ -0.61
RTN3-207ENST00000536011 TSPAN19P0C672 248 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 CCL2P13500 99 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 ANPEPP15144 967 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 STOMP27105 288 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 GCH1P30793 250 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 GDI2P50395 445 aaKnown RBP11.23□□□□□ -0.61
RTN3-207ENST00000536011 RAP1BP61224 184 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 PCBD1P61457 104 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 RAP1AP62834 184 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 SELENOWP63302 87 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 RUNX1T1Q06455 604 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 PABPC1L2AQ5JQF8 200 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 THEM4Q5T1C6 240 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 SHQ1Q6PI26 577 aaKnown RBP11.23□□□□□ -0.61
RTN3-207ENST00000536011 RINLQ6ZS11 566 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 MICU2Q8IYU8 434 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 ALDH16A1Q8IZ83 802 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 PAQR4Q8N4S7 273 aaPredicted RBP11.23□□□□□ -0.61
RTN3-207ENST00000536011 CPEB3Q8NE35 698 aaKnown RBP11.23□□□□□ -0.61
RTN3-207ENST00000536011 OR1J1Q8NGS3 322 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 MOSPD2Q8NHP6 518 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 TMEM186Q96B77 213 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 BPIFA2Q96DR5 249 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 RBP7Q96R05 134 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 RACGAP1Q9H0H5 632 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 OR51B6Q9H340 312 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 DECR2Q9NUI1 292 aa11.23□□□□□ -0.61
RTN3-207ENST00000536011 CGGBP1Q9UFW8 167 aaPredicted RBP11.23□□□□□ -0.61
RTN3-207ENST00000536011 LOC100653049A0A140TA62 436 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 H3BSA7 217 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 TPD52L2O43399 206 aaKnown RBP11.22□□□□□ -0.61
RTN3-207ENST00000536011 RP2O75695 350 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 KRT34O76011 436 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 NCR1O76036 304 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 IGHV3-13P01766 116 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 IGHMP01871 453 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 IFI30P13284 250 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 CCNOP22674 350 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 COL8A2P25067 703 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 RPL27P61353 136 aaKnown RBP11.22□□□□□ -0.61
RTN3-207ENST00000536011 CCL8P80075 99 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 TOP3AQ13472 1001 aaPredicted RBP11.22□□□□□ -0.61
RTN3-207ENST00000536011 SGCAQ16586 387 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms