RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 C8orf4Q9NR00 106 aa14.38□□□□□ -0.11
PACSIN3-210ENST00000533686 B3GNT2Q9NY97 397 aa14.38□□□□□ -0.11
PACSIN3-210ENST00000533686 B9D1Q9UPM9 204 aa14.38□□□□□ -0.11
PACSIN3-210ENST00000533686 IGLV1-36A0A0B4J1U3 117 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 A0A1W2PR80 420 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 A6NNC1 897 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 ZAR1LA6NP61 321 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 DEFB108AA8MXU0 73 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 H0YHG0 523 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 ZNF3P17036 446 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 LAP3P28838 519 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 CDAP32320 146 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 SLC25A1P53007 311 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 RAD23AP54725 363 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 CRMP1Q14194 572 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 C3orf36Q3SXR2 165 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 FAM27BQ5VT28 67 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 SLX4IPQ5VYV7 408 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 TMEM236Q5W0B7 351 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 GLB1L2Q8IW92 636 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 SKA3Q8IX90 412 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 OR6V1Q8N148 313 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 TSSK2Q96PF2 358 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 SLC29A1Q99808 456 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 PRRG3Q9BZD7 231 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 NMNAT2Q9BZQ4 307 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 SRA1Q9HD15 236 aaKnown RBP14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 RPRD1BQ9NQG5 326 aaKnown RBP14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 ZNF224Q9NZL3 707 aa14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 CRNNQ9UBG3 495 aaPredicted RBP14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 COA3Q9Y2R0 106 aaPredicted RBP14.37□□□□□ -0.11
PACSIN3-210ENST00000533686 HECTD1Q9ULT8 2610 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 DCTN6O00399 190 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 CASQ2O14958 399 aaPredicted RBP14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 SURF4O15260 269 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 UBL3O95164 117 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 CBR1P16152 277 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 MSR1P21757 451 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 EPHA2P29317 976 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 SSTR2P30874 369 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 NR1H2P55055 460 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 TRIP10Q15642 601 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 SGCAQ16586 387 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 ZNF787Q6DD87 383 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 CYB561A3Q8NBI2 242 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 OR2T4Q8NH00 348 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 SLC38A2Q96QD8 506 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 SH3GL3Q99963 347 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 WACQ9BTA9 647 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 SEC61A2Q9H9S3 476 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 POLE4Q9NR33 117 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 NPAP1Q9NZP6 1156 aa14.36□□□□□ -0.11
PACSIN3-210ENST00000533686 A0A1W2PPL8 197 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 ZNF503-AS2A6NEH8 195 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 SIAH2O43255 324 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 IGKV3-15P01624 115 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 HLA-HP01893 362 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 HRGP04196 525 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 CST2P09228 141 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 PAICSP22234 425 aaKnown RBP14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 ARR3P36575 388 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 POLR2IP36954 125 aaKnown RBP14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 CAPZA2P47755 286 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 PTDSS1P48651 473 aaKnown RBP14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 TUBA1BP68363 451 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 TUBA4AP68366 448 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 GLO1Q04760 184 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 SNAPC1Q16533 368 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 KCNMB1Q16558 191 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 GSG1Q2KHT4 349 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 SLC36A2Q495M3 483 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 NCMAPQ5T1S8 102 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 C12orf73Q69YU5 71 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 ALKBH2Q6NS38 261 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 TMEM108Q6UXF1 575 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 TUBA1AQ71U36 451 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 SLC16A14Q7RTX9 510 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 SYT9Q86SS6 491 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 PACRGLQ8N7B6 248 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 PLEKHA8Q96JA3 519 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 RDH12Q96NR8 316 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 KCNN2Q9H2S1 579 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 RIBC2Q9H4K1 309 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 RERGLQ9H628 205 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 ESRP2Q9H6T0 727 aaKnown RBP14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 RNPEPL1Q9HAU8 725 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 RASSF1Q9NS23 344 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 TVP23BQ9NYZ1 205 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 FBXL3Q9UKT7 428 aa14.35□□□□□ -0.11
PACSIN3-210ENST00000533686 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 DPRXA6NFQ7 191 aa14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 E9PQ18 207 aa14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 CTAG2O75638 210 aa14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 IGLV1-44P01699 117 aa14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 SCG5P05408 212 aa14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 GAAP10253 952 aa14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 CD79AP11912 226 aa14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 PTAFRP25105 342 aa14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 LOXP28300 417 aaPredicted RBP14.34□□□□□ -0.11
PACSIN3-210ENST00000533686 CENPAP49450 140 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms