RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 TMCC2O75069 709 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 AGR2O95994 175 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 DBIP07108 87 aaKnown RBP7.34□□□□□ -1.23
NEDD8-207ENST00000533242 GSTT2P0CG29 244 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 GSTT2BP0CG30 244 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 ATP6V1E1P36543 226 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 ACAA2P42765 397 aaKnown RBP7.34□□□□□ -1.23
NEDD8-207ENST00000533242 HCCSP53701 268 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 CRMP1Q14194 572 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 KLHL12Q53G59 568 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 DDI2Q5TDH0 399 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 CNIH2Q6PI25 160 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 RANBP3LQ86VV4 465 aaPredicted RBP7.34□□□□□ -1.23
NEDD8-207ENST00000533242 LNX2Q8N448 690 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 KLHL36Q8N4N3 616 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 SLC37A3Q8NCC5 494 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 DNAJA4Q8WW22 397 aaPredicted RBP7.34□□□□□ -1.23
NEDD8-207ENST00000533242 RFKQ969G6 155 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 TMCO6Q96DC7 493 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 BPIFA2Q96DR5 249 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 WDYHV1Q96HA8 205 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 HS6ST2Q96MM7 605 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 SOSTQ9BQB4 213 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 SFXN3Q9BWM7 321 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 OR51V1Q9H2C8 321 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 PPP1R3EQ9H7J1 279 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 MED17Q9NVC6 651 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 RTTNQ86VV8 2226 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 A0A1B0GWA3 101 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 HTR3EA5X5Y0 456 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 A6NIN4 97 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SNTNA6NMZ2 147 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 GTPBP1O00178 669 aaKnown RBP7.33□□□□□ -1.24
NEDD8-207ENST00000533242 TP53I11O14683 189 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 TRAPPC6AO75865 159 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 CCNKO75909 580 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 PPP1R3DO95685 299 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 APOA1P02647 267 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SAGP10523 405 aaPredicted RBP7.33□□□□□ -1.24
NEDD8-207ENST00000533242 IFNA8P32881 189 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 AGFG1P52594 562 aaKnown RBP7.33□□□□□ -1.24
NEDD8-207ENST00000533242 OR10A3P58181 314 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 EIPR1Q53HC9 387 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 PYDC2Q56P42 97 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 ATAD3CQ5T2N8 411 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 EEF1A1P5Q5VTE0 462 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 NPSR1Q6W5P4 371 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SLC29A4Q7RTT9 530 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SAMD14Q8IZD0 417 aaPredicted RBP7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SLC7A5P1Q8MH63 180 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 VWA5B2Q8N398 1253 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 LRRC17Q8N6Y2 441 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 C9orf106Q8NAJ2 232 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 OR13C5Q8NGS8 318 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 OR52N1Q8NH53 320 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 ZPLD1Q8TCW7 415 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 CHAC2Q8WUX2 184 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 ZNRF4Q8WWF5 429 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 TP53INP1Q96A56 240 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 ST6GAL2Q96JF0 529 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 TNFRSF13CQ96RJ3 184 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 PELOQ9BRX2 385 aaKnown RBP7.33□□□□□ -1.24
NEDD8-207ENST00000533242 ALG8Q9BVK2 526 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 PIGMQ9H3S5 423 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SLC6A5Q9Y345 797 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 A0A0B4J2E0 115 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 A0A1B0GX12 115 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 IRGMA1A4Y4 181 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 MEIOCA2RUB1 952 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 OR6C76A6NM76 312 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 B4DXG7 233 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SEC14L5O43304 696 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 RNF13O43567 381 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 AKAP8O43823 692 aaKnown RBP7.33□□□□□ -1.24
NEDD8-207ENST00000533242 PTP4A3O75365 173 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 NKX2-2O95096 273 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 TFPIP10646 304 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 DRD5P21918 477 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SLC2A5P22732 501 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SHC1P29353 583 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SLC16A1P53985 500 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 CTBP2P56545 445 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 COPZ1P61923 177 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 POU6F2P78424 691 aaPredicted RBP7.33□□□□□ -1.24
NEDD8-207ENST00000533242 ACSM1Q08AH1 577 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 ASAH1Q13510 395 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 TMPRSS11FQ6ZWK6 438 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 MEPCEQ7L2J0 689 aaKnown RBP7.33□□□□□ -1.24
NEDD8-207ENST00000533242 ACBD7Q8N6N7 88 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 OR10H4Q8NGA5 316 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 OR51L1Q8NGJ5 315 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SETD6Q8TBK2 473 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 HOXB13Q92826 284 aaPredicted RBP7.33□□□□□ -1.24
NEDD8-207ENST00000533242 SLC35B4Q969S0 331 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 DMRTB1Q96MA1 342 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 STACQ99469 402 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 TEAD3Q99594 435 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 KLHDC3Q9BQ90 382 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 IFT27Q9BW83 186 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 BEX2Q9BXY8 128 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms