RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 KCNN2Q9H2S1 579 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 C1orf198Q9H425 327 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 V9GYQ6 96 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 DIRAS1O95057 198 aa26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 MMP7P09237 267 aaPredicted RBP26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 MSX2P35548 267 aaPredicted RBP26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 RPL4P36578 427 aaKnown RBP26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 EVX1P49640 407 aa26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 MXRA7P84157 204 aa26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 LOXL1Q08397 574 aaPredicted RBP26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 KRT72Q14CN4 511 aa26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 DEFB107AQ8IZN7 70 aa26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 MRPL37Q9BZE1 423 aaKnown RBP26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 DYNLRB1Q9NP97 96 aa26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 MYOZ1Q9NP98 299 aaPredicted RBP26.1■■□□□ 1.77
SSSCA1-207ENST00000533115 ABCA1O95477 2261 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 SH3PXD2BA1X283 911 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 DYNC1I1O14576 645 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 PTHP01270 115 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 SEMG1P04279 462 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 ITGA2P17301 1181 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 ERVK-25P63136 954 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 PLP2Q04941 152 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 SGCAQ16586 387 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 IQCCQ4KMZ1 466 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 ARIH2OSQ8N7S6 290 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 DHRS1Q96LJ7 313 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 NSMCE2Q96MF7 247 aa26.09■■□□□ 1.77
SSSCA1-207ENST00000533115 IQCMA0A1B0GVH7 501 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 ARPC2O15144 300 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 ERCC1P07992 297 aaPredicted RBP26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 CD14P08571 375 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 ZNF26P17031 533 aaPredicted RBP26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 LIMS1P48059 325 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 MNAT1P51948 309 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 SPATS1Q496A3 300 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 ZCCHC24Q8N2G6 241 aaKnown RBP26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 NDEL1Q9GZM8 345 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 CDH20Q9HBT6 801 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 CCNB1IP1Q9NPC3 277 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 GRHPRQ9UBQ7 328 aa26.08■■□□□ 1.77
SSSCA1-207ENST00000533115 TRBV4-1A0A0J9YWV2 114 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 SLC22A23A1A5C7 686 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 NDUFS8O00217 210 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 CD5LO43866 347 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 PTP4A3O75365 173 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 ADRA2AP08913 450 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 CCL2P13500 99 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 OMPP47874 163 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 SEC23BQ15437 767 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 TBC1D28Q2M2D7 210 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 FAM27BQ5VT28 67 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 PAQR4Q8N4S7 273 aaPredicted RBP26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 FITM2Q8N6M3 262 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 OR1J2Q8NGS2 313 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 OR52J3Q8NH60 311 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 NEU4Q8WWR8 484 aaPredicted RBP26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 KRCC1Q9NPI7 259 aaPredicted RBP26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 ADAM18Q9Y3Q7 739 aa26.07■■□□□ 1.76
SSSCA1-207ENST00000533115 SNAP29O95721 258 aa26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 IGFBP1P08833 259 aaPredicted RBP26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 HSF2Q03933 536 aa26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 CARTPTQ16568 116 aa26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 PABPC1L2AQ5JQF8 200 aa26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 SYT3Q9BQG1 590 aa26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 PIMREGQ9BSJ6 248 aa26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 FUZQ9BT04 418 aa26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 LRMDAQ9H2I8 198 aa26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 SIGLEC7Q9Y286 467 aa26.06■■□□□ 1.76
SSSCA1-207ENST00000533115 LOC390937A0A1W2PQ73 354 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 VWC2LB2RUY7 222 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 SYNGR3O43761 229 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 NDUFB2O95178 105 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 ZNF32P17041 273 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 GUCA1AP43080 201 aaPredicted RBP26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 SMIM11AP58511 58 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 TMEM249Q2WGJ8 235 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 FOXL2NBQ6ZUU3 175 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 LRP11Q86VZ4 500 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 MCUR1Q96AQ8 359 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 Q96M85 177 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 FZR1Q9UM11 496 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 AURKCQ9UQB9 309 aa26.05■■□□□ 1.76
SSSCA1-207ENST00000533115 H7C1C5 153 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 TLX2O43763 284 aaPredicted RBP26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 FAM107AO95990 144 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 FAM157BP0CG42 384 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 USF1P22415 310 aaPredicted RBP26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 APEX1P27695 318 aaKnown RBP26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 APLNRP35414 380 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 LCN6P62502 163 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 MESTQ5EB52 335 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 FAM122BQ7Z309 247 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 CPEB3Q8NE35 698 aaKnown RBP26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 RSRC1Q96IZ7 334 aaKnown RBP26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 ZNF570Q96NI8 536 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 REV1Q9UBZ9 1251 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 ADAM21Q9UKJ8 722 aa26.04■■□□□ 1.76
SSSCA1-207ENST00000533115 SONP18583 2426 aaKnown RBP26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 ANK3Q12955 4377 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms