RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CARD17Q5XLA6 110 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 LRFN4Q6PJG9 635 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 USP51Q70EK9 711 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 SSX8Q7RTT4 187 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 CCDC71Q8IV32 467 aaPredicted RBP11.01□□□□□ -0.65
COPB1-208ENST00000532088 FAM26EQ8N5C1 309 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 ZNF610Q8N9Z0 462 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 OR2T4Q8NH00 348 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 FAM81AQ8TBF8 368 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 TMEM163Q8TC26 289 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 ITLN2Q8WWU7 325 aaPredicted RBP11.01□□□□□ -0.65
COPB1-208ENST00000532088 ZNF184Q99676 751 aaPredicted RBP11.01□□□□□ -0.65
COPB1-208ENST00000532088 HDHD5Q9BXW7 423 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 OPN3Q9H1Y3 402 aaPredicted RBP11.01□□□□□ -0.65
COPB1-208ENST00000532088 SYT4Q9H2B2 425 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 CRLF2Q9HC73 371 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 IMPAD1Q9NX62 359 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 TAS2R16Q9NYV7 291 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 RAB26Q9ULW5 256 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 MOKQ9UQ07 419 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 CHD6Q8TD26 2715 aa11□□□□□ -0.65
COPB1-208ENST00000532088 CLEC18AA5D8T8 446 aa11□□□□□ -0.65
COPB1-208ENST00000532088 ZNF99A8MXY4 864 aaPredicted RBP11□□□□□ -0.65
COPB1-208ENST00000532088 PRODHO43272 600 aa11□□□□□ -0.65
COPB1-208ENST00000532088 PRKYO43930 277 aa11□□□□□ -0.65
COPB1-208ENST00000532088 KHDRBS3O75525 346 aaKnown RBP11□□□□□ -0.65
COPB1-208ENST00000532088 CLDN14O95500 239 aa11□□□□□ -0.65
COPB1-208ENST00000532088 SLC2A10O95528 541 aa11□□□□□ -0.65
COPB1-208ENST00000532088 ZNF16P17020 682 aaPredicted RBP11□□□□□ -0.65
COPB1-208ENST00000532088 NPR2P20594 1047 aa11□□□□□ -0.65
COPB1-208ENST00000532088 PSMB1P20618 241 aaKnown RBP11□□□□□ -0.65
COPB1-208ENST00000532088 PAX7P23759 505 aa11□□□□□ -0.65
COPB1-208ENST00000532088 ROR2Q01974 943 aaKnown RBP11□□□□□ -0.65
COPB1-208ENST00000532088 LGALS3BPQ08380 585 aa11□□□□□ -0.65
COPB1-208ENST00000532088 FAPQ12884 760 aa11□□□□□ -0.65
COPB1-208ENST00000532088 TMED1Q13445 227 aa11□□□□□ -0.65
COPB1-208ENST00000532088 PHYHD1Q5SRE7 291 aa11□□□□□ -0.65
COPB1-208ENST00000532088 ZNF474Q6S9Z5 364 aaPredicted RBP11□□□□□ -0.65
COPB1-208ENST00000532088 CLEC18BQ6UXF7 455 aa11□□□□□ -0.65
COPB1-208ENST00000532088 GID4Q8IVV7 300 aa11□□□□□ -0.65
COPB1-208ENST00000532088 UBE2J2Q8N2K1 259 aa11□□□□□ -0.65
COPB1-208ENST00000532088 C17orf78Q8N4C9 275 aa11□□□□□ -0.65
COPB1-208ENST00000532088 TCEANCQ8N8B7 351 aa11□□□□□ -0.65
COPB1-208ENST00000532088 SYT14Q8NB59 555 aa11□□□□□ -0.65
COPB1-208ENST00000532088 CLEC18CQ8NCF0 446 aa11□□□□□ -0.65
COPB1-208ENST00000532088 RHOXF1Q8NHV9 184 aa11□□□□□ -0.65
COPB1-208ENST00000532088 CA5BP1Q8WTZ4 195 aa11□□□□□ -0.65
COPB1-208ENST00000532088 CYGBQ8WWM9 190 aa11□□□□□ -0.65
COPB1-208ENST00000532088 ALKBH3Q96Q83 286 aaPredicted RBP11□□□□□ -0.65
COPB1-208ENST00000532088 WACQ9BTA9 647 aa11□□□□□ -0.65
COPB1-208ENST00000532088 NUAK2Q9H093 628 aa11□□□□□ -0.65
COPB1-208ENST00000532088 HINT3Q9NQE9 182 aaKnown RBP11□□□□□ -0.65
COPB1-208ENST00000532088 B9D1Q9UPM9 204 aa11□□□□□ -0.65
COPB1-208ENST00000532088 GPR52Q9Y2T5 361 aa11□□□□□ -0.65
COPB1-208ENST00000532088 INTS1Q8N201 2190 aaKnown RBP11□□□□□ -0.65
COPB1-208ENST00000532088 IGLV1-36A0A0B4J1U3 117 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 SNTNA6NMZ2 147 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 EEF1E1-BLOC1S5C9J1V9 151 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 EEF1E1O43324 174 aaKnown RBP10.99□□□□□ -0.65
COPB1-208ENST00000532088 TLX2O43763 284 aaPredicted RBP10.99□□□□□ -0.65
COPB1-208ENST00000532088 SLC16A7O60669 478 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 HRGP04196 525 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 ITGA5P08648 1049 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 CTLA4P16410 223 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 GABRB1P18505 474 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 IGHV1-2P23083 117 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 CD79BP40259 229 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 PEX19P40855 299 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 MRPS34P82930 218 aaKnown RBP10.99□□□□□ -0.65
COPB1-208ENST00000532088 SORDQ00796 357 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 GLO1Q04760 184 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 KCNMB1Q16558 191 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 CEACAM16Q2WEN9 425 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 SFRP5Q5T4F7 317 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 AADACL4Q5VUY2 407 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 OR7E24Q6IFN5 339 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 LINGO2Q7L985 606 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 CXXC5Q7LFL8 322 aaKnown RBP10.99□□□□□ -0.65
COPB1-208ENST00000532088 DPPA2Q7Z7J5 298 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 CCDC36Q8IYA8 594 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 ENTHD1Q8IYW4 607 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 C8orf59Q8N0T1 100 aaPredicted RBP10.99□□□□□ -0.65
COPB1-208ENST00000532088 OR6V1Q8N148 313 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 FBLIM1Q8WUP2 373 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 RNASE6Q93091 150 aaKnown RBP10.99□□□□□ -0.65
COPB1-208ENST00000532088 PTP4A1Q93096 173 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 Q96MT0 163 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 MUS81Q96NY9 551 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 FOXB1Q99853 325 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 RBM24Q9BX46 236 aaKnown RBP10.99□□□□□ -0.65
COPB1-208ENST00000532088 ANKRD60Q9BZ19 345 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 Q9H521 79 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 OBP2BQ9NPH6 170 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 KCNJ16Q9NPI9 418 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 RPRD1BQ9NQG5 326 aaKnown RBP10.99□□□□□ -0.65
COPB1-208ENST00000532088 ZNF226Q9NYT6 803 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 UGT2A1Q9Y4X1 527 aa10.99□□□□□ -0.65
COPB1-208ENST00000532088 RP1L1Q8IWN7 2480 aaPredicted RBP10.98□□□□□ -0.65
COPB1-208ENST00000532088 ZNF462Q96JM2 2506 aa10.98□□□□□ -0.65
COPB1-208ENST00000532088 IGKV1D-43A0A0B4J1Z2 117 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms