RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 SLC2A10O95528 541 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 KDELR2P33947 212 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 APLNRP35414 380 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 ARFIP2P53365 341 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 HSF2Q03933 536 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 LAPTM4AQ15012 233 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 PCGF3Q3KNV8 242 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 LRRC23Q53EV4 343 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-207ENST00000531727 TMEM154Q6P9G4 183 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 RINLQ6ZS11 566 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 SNX33Q8WV41 574 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 HDAC2Q92769 488 aaKnown RBP14.38□□□□□ -0.11
CPSF1-207ENST00000531727 NABP1Q96AH0 204 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 NMD3Q96D46 503 aaKnown RBP14.38□□□□□ -0.11
CPSF1-207ENST00000531727 KCNN2Q9H2S1 579 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 TXNIPQ9H3M7 391 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 CCNB1IP1Q9NPC3 277 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 GID8Q9NWU2 228 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 SLCO1C1Q9NYB5 712 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 NKIRAS2Q9NYR9 191 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 HIF3AQ9Y2N7 669 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 UGT2A1Q9Y4X1 527 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 IGKV1D-43A0A0B4J1Z2 117 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 FAM157AC9JC47 383 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 PIP5K1CO60331 668 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 SASH3O75995 380 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 NR2C1P13056 603 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 CDAP32320 146 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 CCL8P80075 99 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 ST3GAL3Q11203 375 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 PABPC1L2AQ5JQF8 200 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 CGB2Q6NT52 195 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 PCYOX1LQ8NBM8 494 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 CPEB3Q8NE35 698 aaKnown RBP14.37□□□□□ -0.11
CPSF1-207ENST00000531727 OR2T12Q8NG77 320 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 OR1J1Q8NGS3 322 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 TPD52L3Q96J77 140 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 FGFR1OP2Q9NVK5 253 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 TREM2Q9NZC2 230 aa14.37□□□□□ -0.11
CPSF1-207ENST00000531727 LOC100653049A0A140TA62 436 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 HTR3EA5X5Y0 456 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 GMNCA6NCL1 334 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 KRT34O76011 436 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 MSMBP08118 114 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 GAAP10253 952 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 ZNF32P17041 273 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 STOMP27105 288 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 LMO4P61968 165 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 SELENOWP63302 87 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 FMODQ06828 376 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 CD47Q08722 323 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 SF3A3Q12874 501 aaKnown RBP eCLIP14.36□□□□□ -0.118e-12■■■■■ 42
CPSF1-207ENST00000531727 TAF11Q15544 211 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 SGCAQ16586 387 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 MOGQ16653 247 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 ALG10Q5BKT4 473 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 SLC25A47Q6Q0C1 308 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 MICU2Q8IYU8 434 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 ICA1LQ8NDH6 482 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 NSMAFQ92636 917 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 TMEM186Q96B77 213 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 PRRC1Q96M27 445 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 HIF1ANQ9NWT6 349 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 A4GNTQ9UNA3 340 aa14.36□□□□□ -0.11
CPSF1-207ENST00000531727 ELOVL7A1L3X0 281 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 CDC14BO60729 498 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 IGHV3-13P01766 116 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 IGHMP01871 453 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 MT-ND5P03915 603 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 IFI30P13284 250 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 DRD4P21917 467 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 CCNOP22674 350 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 IFNA8P32881 189 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 CRYBB2P43320 205 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 RPL27P61353 136 aaKnown RBP14.35□□□□□ -0.11
CPSF1-207ENST00000531727 TEKQ02763 1124 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 TOP3AQ13472 1001 aaPredicted RBP14.35□□□□□ -0.11
CPSF1-207ENST00000531727 OR51F2Q8NH61 342 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 BPIFA2Q96DR5 249 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 POM121L2Q96KW2 1035 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 ALG12Q9BV10 488 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 LPAR2Q9HBW0 351 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 METRNQ9UJH8 293 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 GRIP1Q9Y3R0 1128 aa14.35□□□□□ -0.11
CPSF1-207ENST00000531727 LOC100509620A0A075B734 347 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 IGHV1-69-2A0A0G2JMI3 117 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 ITGA2P17301 1181 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 WNT5AP41221 380 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 PSG4Q00888 419 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 GLO1Q04760 184 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 THEM4Q5T1C6 240 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 FAM27BQ5VT28 67 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 ZNF101Q8IZC7 436 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 AKR7LQ8NHP1 331 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 FNDC8Q8TC99 324 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 LZICQ8WZA0 190 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 GTF3AQ92664 365 aaKnown RBP14.34□□□□□ -0.11
CPSF1-207ENST00000531727 LRRC37BQ96QE4 947 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 RBP7Q96R05 134 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 EIF3KQ9UBQ5 218 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms