RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 GAAP10253 952 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 EPXP11678 715 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 B4GALT1P15291 398 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 GABRB1P18505 474 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 PYCR1P32322 319 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 CD47Q08722 323 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 DAZAP2Q15038 168 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-205ENST00000527046 TRIP10Q15642 601 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 NRN1LQ496H8 165 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 FAM27BQ5VT28 67 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 OR7E24Q6IFN5 339 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 KLHL24Q6TFL4 600 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 LYPD4Q6UWN0 246 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 MEX3BQ6ZN04 569 aaKnown RBP9.4□□□□□ -0.9
NEDD8-205ENST00000527046 HDDC2Q7Z4H3 204 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 MYPOPQ86VE0 399 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-205ENST00000527046 SLC22A24Q8N4F4 322 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 BBS1Q8NFJ9 593 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 OR52L1Q8NGH7 329 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 OR52N5Q8NH56 324 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 FNDC8Q8TC99 324 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 EME1Q96AY2 570 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 FBXO17Q96EF6 278 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 DACH2Q96NX9 599 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 SH3GL3Q99963 347 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 SEC61A2Q9H9S3 476 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 RPRD1BQ9NQG5 326 aaKnown RBP9.4□□□□□ -0.9
NEDD8-205ENST00000527046 POLE4Q9NR33 117 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 FAM118AQ9NWS6 357 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF226Q9NYT6 803 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 TVP23BQ9NYZ1 205 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 CRNNQ9UBG3 495 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-205ENST00000527046 AASSQ9UDR5 926 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 NDRG4Q9ULP0 352 aaKnown RBP9.4□□□□□ -0.9
NEDD8-205ENST00000527046 FKBP7Q9Y680 259 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 ADGRG4Q8IZF6 3080 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 PKDREJQ9NTG1 2253 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 CIB4A0PJX0 185 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 DPRXA6NFQ7 191 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 XKRYO14609 159 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 SLC16A6O15403 523 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 KHDRBS3O75525 346 aaKnown RBP9.39□□□□□ -0.91
NEDD8-205ENST00000527046 HMGN1P05114 100 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 GYPBP06028 91 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 HOXB1P14653 301 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-205ENST00000527046 PPP3CBP16298 524 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 CRYGSP22914 178 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 LAP3P28838 519 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 KIR2DL3P43628 341 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 SLC25A1P53007 311 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 SH3BGRP55822 239 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-205ENST00000527046 ADARB1P78563 741 aaKnown RBP9.39□□□□□ -0.91
NEDD8-205ENST00000527046 MEP1BQ16820 701 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 AADACL4Q5VUY2 407 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF813Q6ZN06 617 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 ABHD12BQ7Z5M8 362 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-205ENST00000527046 P2RY8Q86VZ1 359 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF584Q8IVC4 421 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 CPOQ8IVL8 374 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 GALNT4Q8N4A0 578 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 C17orf78Q8N4C9 275 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 PACRGLQ8N7B6 248 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 SLC26A10Q8NG04 563 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 OR51L1Q8NGJ5 315 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 OR9Q1Q8NGQ5 310 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 HSD17B8Q92506 261 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 PITX2Q99697 317 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 C1QTNF6Q9BXI9 259 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 RACGAP1Q9H0H5 632 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 RIBC2Q9H4K1 309 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 SIAEQ9HAT2 523 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 B3GAT2Q9NPZ5 323 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 KIF17Q9P2E2 1029 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 KLHL21Q9UJP4 597 aa9.39□□□□□ -0.91
NEDD8-205ENST00000527046 CADP27708 2225 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 CCDC182A6NF36 153 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 IGKV3-15P01624 115 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 IGLV1-44P01699 117 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 HLA-HP01893 362 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 CELA3BP08861 270 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 OR8G3PP0DMU2 310 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 PRF1P14222 555 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 SPI1P17947 270 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 IL32P24001 234 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 GGT2P36268 569 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 HIST1H3AP68431 136 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 TGFBR3Q03167 851 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 RSPO1Q2MKA7 263 aaPredicted RBP9.38□□□□□ -0.91
NEDD8-205ENST00000527046 HIST2H3PS2Q5TEC6 136 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF787Q6DD87 383 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 LAIR2Q6ISS4 152 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 PLBD1Q6P4A8 553 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 B3GLCTQ6Y288 498 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 HIST2H3AQ71DI3 136 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 FAM169BQ8N8A8 192 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 TCEANCQ8N8B7 351 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF511Q8NB15 262 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 CPEB3Q8NE35 698 aaKnown RBP9.38□□□□□ -0.91
NEDD8-205ENST00000527046 LILRB1Q8NHL6 650 aaPredicted RBP9.38□□□□□ -0.91
NEDD8-205ENST00000527046 FAM222BQ8WU58 562 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms