RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CDAP32320 146 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 NR1H2P55055 460 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 TUBA1BP68363 451 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 TUBA4AP68366 448 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 MRPS34P82930 218 aaKnown RBP11.29□□□□□ -0.6
SMPD1-202ENST00000526280 ETFDHQ16134 617 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 NCMAPQ5T1S8 102 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 KDM4DQ6B0I6 523 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 TUBA1AQ71U36 451 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 ABCA12Q86UK0 2595 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 JAZF1Q86VZ6 243 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 SKA3Q8IX90 412 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 PARP8Q8N3A8 854 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 GALNT4Q8N4A0 578 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 FAM169BQ8N8A8 192 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 NPEPL1Q8NDH3 523 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 OR52E2Q8NGJ4 325 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 TEX47Q8TBZ9 253 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 PIK3IP1Q96FE7 263 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 NMNAT3Q96T66 252 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 DDOQ99489 341 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 C1QTNF6Q9BXI9 259 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 SYT4Q9H2B2 425 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 ESRP2Q9H6T0 727 aaKnown RBP11.29□□□□□ -0.6
SMPD1-202ENST00000526280 SIAEQ9HAT2 523 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 PAPOLBQ9NRJ5 636 aaKnown RBP11.29□□□□□ -0.6
SMPD1-202ENST00000526280 B3GNT2Q9NY97 397 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 ZNF224Q9NZL3 707 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 RAB26Q9ULW5 256 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 ITPR2Q14571 2701 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 APCP25054 2843 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 OR6C68A6NDL8 312 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 SAC3D1A6NKF1 404 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 H0YJX3 145 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 SLC16A7O60669 478 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 FARS2O95363 451 aaKnown RBP11.28□□□□□ -0.6
SMPD1-202ENST00000526280 RENP00797 406 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 HLA-HP01893 362 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 CBR1P16152 277 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 POU1F1P28069 291 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 CAPZA2P47755 286 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 GIPRP48546 466 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 ZNF83P51522 516 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 CDK5Q00535 292 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMPD1-202ENST00000526280 PGGHGQ32M88 737 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 SLC27A4Q6P1M0 643 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 LEG1Q6P5S2 330 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 FOXL2NBQ6ZUU3 175 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 HTRA1Q92743 480 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 NABP1Q96AH0 204 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 EME1Q96AY2 570 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 OSBPL10Q9BXB5 764 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 NUAK2Q9H093 628 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 CLEC4MQ9H2X3 399 aaPredicted RBP11.28□□□□□ -0.6
SMPD1-202ENST00000526280 MOV10Q9HCE1 1003 aaKnown RBP11.28□□□□□ -0.6
SMPD1-202ENST00000526280 KRT84Q9NSB2 600 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 CRNNQ9UBG3 495 aaPredicted RBP11.28□□□□□ -0.6
SMPD1-202ENST00000526280 ROS1P08922 2347 aa11.28□□□□□ -0.6
SMPD1-202ENST00000526280 HEATR1Q9H583 2144 aaKnown RBP11.27□□□□□ -0.61
SMPD1-202ENST00000526280 A0A1W2PPR1 153 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 DPPA5A6NC42 116 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 M0R1B8 84 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 DCTN6O00399 190 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 MITFO75030 526 aaPredicted RBP11.27□□□□□ -0.61
SMPD1-202ENST00000526280 KHDRBS3O75525 346 aaKnown RBP11.27□□□□□ -0.61
SMPD1-202ENST00000526280 IGKV3-15P01624 115 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 IGLV1-44P01699 117 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 CD79AP11912 226 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 CD40P25942 277 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 CRABP1P29762 137 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 GRK5P34947 590 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 GUCA1AP43080 201 aaPredicted RBP11.27□□□□□ -0.61
SMPD1-202ENST00000526280 CRISP1P54107 249 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 KRTAP10-9P60411 292 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 ESRRGP62508 458 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 PPP2R2BQ00005 443 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 BSPH1Q075Z2 132 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 GINS1Q14691 196 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 SGCAQ16586 387 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 C3orf36Q3SXR2 165 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 FAM27BQ5VT28 67 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 ACSM5Q6NUN0 579 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 TMEM108Q6UXF1 575 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 ZBTB46Q86UZ6 589 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 TMEM200AQ86VY9 491 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 OR6V1Q8N148 313 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 IQCF1Q8N6M8 205 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 SDR9C7Q8NEX9 313 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 NANOS1Q8WY41 292 aaKnown RBP11.27□□□□□ -0.61
SMPD1-202ENST00000526280 TSSK2Q96PF2 358 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 RBM4BQ9BQ04 359 aaKnown RBP11.27□□□□□ -0.61
SMPD1-202ENST00000526280 TMEM204Q9BSN7 226 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 RBM4Q9BWF3 364 aaKnown RBP11.27□□□□□ -0.61
SMPD1-202ENST00000526280 CXorf56Q9H5V9 222 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 SEC61A2Q9H9S3 476 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms