RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 UBE2J2Q8N2K1 259 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 ZNF808Q8N4W9 903 aaPredicted RBP5.68□□□□□ -1.5
CD44-214ENST00000525211 LINC00471Q8N535 108 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 LINC01560Q8TB33 94 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 BCL2L2Q92843 193 aaPredicted RBP5.68□□□□□ -1.5
CD44-214ENST00000525211 NABP1Q96AH0 204 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 APH1AQ96BI3 265 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 ZFP3Q96NJ6 502 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 IL4I1Q96RQ9 567 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 SH3GL3Q99963 347 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 RBM4BQ9BQ04 359 aaKnown RBP5.68□□□□□ -1.5
CD44-214ENST00000525211 C9orf16Q9BUW7 83 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 RBM4Q9BWF3 364 aaKnown RBP5.68□□□□□ -1.5
CD44-214ENST00000525211 C1QTNF6Q9BXI9 259 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 LINC00470Q9BZP3 86 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 SYT4Q9H2B2 425 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 CRLF2Q9HC73 371 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 GP6Q9HCN6 339 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 EMC7Q9NPA0 242 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 RPRD1BQ9NQG5 326 aaKnown RBP5.68□□□□□ -1.5
CD44-214ENST00000525211 CMC2Q9NRP2 79 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 GLRX2Q9NS18 164 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 MRPL22Q9NWU5 206 aaKnown RBP5.68□□□□□ -1.5
CD44-214ENST00000525211 NPAP1Q9NZP6 1156 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 VSX1Q9NZR4 365 aaPredicted RBP5.68□□□□□ -1.5
CD44-214ENST00000525211 MALT1Q9UDY8 824 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 NDRG4Q9ULP0 352 aaKnown RBP5.68□□□□□ -1.5
CD44-214ENST00000525211 B9D1Q9UPM9 204 aa5.68□□□□□ -1.5
CD44-214ENST00000525211 COA3Q9Y2R0 106 aaPredicted RBP5.68□□□□□ -1.5
CD44-214ENST00000525211 LRRK2Q5S007 2527 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 A0A1W2PPR1 153 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 C5orf63A6NC05 138 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 ZNF726A6NNF4 738 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 PRR32B1ATL7 298 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 RPL36A-HNRNPH2H7BZ11 118 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 DVL2O14641 736 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 SLC16A7O60669 478 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 RAD51DO75771 328 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 APOL3O95236 402 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 CELA3BP08861 270 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 GAAP10253 952 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 APEHP13798 732 aaKnown RBP5.67□□□□□ -1.5
CD44-214ENST00000525211 IGFBP2P18065 325 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 EPHA1P21709 976 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 SLC2A5P22732 501 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 LOXP28300 417 aaPredicted RBP5.67□□□□□ -1.5
CD44-214ENST00000525211 GGT2P36268 569 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 UGT2B10P36537 528 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 CD79BP40259 229 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 DAP3P51398 398 aaKnown RBP5.67□□□□□ -1.5
CD44-214ENST00000525211 RPS6KA3P51812 740 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 HCCSP53701 268 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 CLRN1P58418 232 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 ESRRGP62508 458 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 CD47Q08722 323 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 DOC2BQ14184 412 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 SF3B4Q15427 424 aaKnown RBP eCLIP5.67□□□□□ -1.5
CD44-214ENST00000525211 GABRA6Q16445 453 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 SMN1Q16637 294 aaKnown RBP5.67□□□□□ -1.5
CD44-214ENST00000525211 FBXL19-AS1Q494R0 122 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 ANKDD1AQ495B1 522 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 SFRP5Q5T4F7 317 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 AADACL4Q5VUY2 407 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 SLC27A4Q6P1M0 643 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 PLBD1Q6P4A8 553 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 XKRXQ6PP77 449 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 Q6ZT83 130 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 FOXL2NBQ6ZUU3 175 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.67□□□□□ -1.5
CD44-214ENST00000525211 CPOQ8IVL8 374 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 SKA3Q8IX90 412 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 RFLNBQ8N5W9 214 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 TCEANCQ8N8B7 351 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 ACBD4Q8NC06 268 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 OR2T33Q8NG76 320 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 OR1K1Q8NGR3 316 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 OR6N1Q8NGY5 312 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 TEX47Q8TBZ9 253 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 SSC4DQ8WTU2 575 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 CA5BP1Q8WTZ4 195 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 APH1BQ8WW43 257 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 ASB5Q8WWX0 329 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 SGCDQ92629 289 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 KISS1RQ969F8 398 aaPredicted RBP5.67□□□□□ -1.5
CD44-214ENST00000525211 ZNF566Q969W8 418 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 S100PBPQ96BU1 408 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 FBXO17Q96EF6 278 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 LRR1Q96L50 414 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 ZNF75AQ96N20 296 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 WFIKKN1Q96NZ8 548 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 PSMG3-AS1Q96PY0 264 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 AMELYQ99218 206 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 PITX2Q99697 317 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 RHNO1Q9BSD3 238 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 ULBP2Q9BZM5 246 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 PIGMQ9H3S5 423 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 RERGLQ9H628 205 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 ZNF556Q9HAH1 456 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 KRCC1Q9NPI7 259 aaPredicted RBP5.67□□□□□ -1.5
CD44-214ENST00000525211 DNAJC27Q9NZQ0 273 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms