RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ELMO1Q92556 727 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 HGDQ93099 445 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TSLPQ969D9 159 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 UBE2E3Q969T4 207 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RFT1Q96AA3 541 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TMIGD2Q96BF3 282 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 S100PBPQ96BU1 408 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TMCO6Q96DC7 493 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CDKN2AIPNLQ96HQ2 116 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 VPS39Q96JC1 886 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ARL5BQ96KC2 179 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RILPQ96NA2 401 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 MUS81Q96NY9 551 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 QKIQ96PU8 341 aaKnown RBP eCLIP1.21□□□□□ -2.22
CD44-212ENST00000524922 RNF157Q96PX1 679 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 FAM111AQ96PZ2 611 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 BTBD9Q96Q07 612 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OR4F4Q96R69 305 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ERGIC2Q96RQ1 377 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CCT8L2Q96SF2 557 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RBBP8Q99708 897 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TBCDQ9BTW9 1192 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OSBPL11Q9BXB4 747 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 FRMD8P1Q9BZ68 369 aaPredicted RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 GANQ9H2C0 597 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RHBGQ9H310 441 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 KCNK15Q9H427 330 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TUBB1Q9H4B7 451 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 XKR8Q9H6D3 395 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 EXO5Q9H790 373 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 METTL17Q9H7H0 456 aaPredicted RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 PTGES2Q9H7Z7 377 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 LRRC40Q9H9A6 602 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ACP6Q9NPH0 428 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ESM1Q9NQ30 184 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TIGARQ9NQ88 270 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SDHAF3Q9NRP4 125 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PNO1Q9NRX1 252 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 TREX1Q9NSU2 369 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ETNK2Q9NVF9 386 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PRODH2Q9UF12 536 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PCYOX1Q9UHG3 505 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RPUSD1Q9UJJ7 312 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 FBXO5Q9UKT4 447 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 FBXW2Q9UKT8 454 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 NUP50Q9UKX7 468 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ZNF346Q9UL40 294 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 PLAGL1Q9UM63 463 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RUVBL2Q9Y230 463 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 NAALAD2Q9Y3Q0 740 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PPIAL4AQ9Y536 164 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 WIF1Q9Y5W5 379 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 MAD1L1Q9Y6D9 718 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 DYNC1H1Q14204 4646 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 MUC2Q02817 5179 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 YLPM1P49750 1951 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 WNK2Q9Y3S1 2297 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 MYCBP2O75592 4640 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 KIAA1549Q9HCM3 1950 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 IGHV3-20A0A0C4DH32 117 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 A0A1B0GVL5 298 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 C2orf92A0A1B0GVN3 265 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 A0A1W2PQD3 144 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 LRIT2A6NDA9 550 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 C17orf105B2RV13 164 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 E7EQL1 145 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SGK494L7N484 410 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ABCD4O14678 606 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 NIPSNAP2O75323 286 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ENTPD5O75356 428 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 FOXH1O75593 365 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PROSCO94903 275 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SEMA3DO95025 777 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SLC16A8O95907 504 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 GAS8O95995 478 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 IGHMP01871 453 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ATP1B1P05026 303 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 YES1P07947 543 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TPM2P07951 284 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SFTPBP07988 381 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 GUSBP08236 651 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SAGP10523 405 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 IL1RNP18510 177 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 UGT1A6P19224 532 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 GGT1P19440 569 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CD22P20273 847 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 DRD5P21918 477 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TUBG1P23258 451 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 EDNRAP25101 427 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 MSNP26038 577 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 GABRA5P31644 462 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CAPGP40121 348 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 RFC3P40938 356 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PTGDSP41222 190 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SLC1A3P43003 542 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PPICP45877 212 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 DNASE1L1P49184 302 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 FNTAP49354 379 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 STARP49675 285 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 NUMBP49757 651 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms