RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 REV1Q9UBZ9 1251 aa10.37□□□□□ -0.75
CLN8-207ENST00000524258 MOKQ9UQ07 419 aa10.37□□□□□ -0.75
CLN8-207ENST00000524258 ARRDC5A6NEK1 342 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 PPP1R3DO95685 299 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 ZNF35P13682 527 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 IFNGR2P38484 337 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 GIPRP48546 466 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 IDH3GP51553 393 aaPredicted RBP10.36□□□□□ -0.75
CLN8-207ENST00000524258 CDH11P55287 796 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 RAB1AP62820 205 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 NKX6-1P78426 367 aaPredicted RBP10.36□□□□□ -0.75
CLN8-207ENST00000524258 PIGFQ07326 219 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 CD47Q08722 323 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 KRR1Q13601 381 aaKnown RBP10.36□□□□□ -0.75
CLN8-207ENST00000524258 KEAP1Q14145 624 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 ENDOGQ14249 297 aaKnown RBP10.36□□□□□ -0.75
CLN8-207ENST00000524258 MSMPQ1L6U9 139 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 GSG1Q2KHT4 349 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 MST1LQ2TV78 715 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 FAM27BQ5VT28 67 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 HS3ST5Q8IZT8 346 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 AQP11Q8NBQ7 271 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 FANK1Q8TC84 345 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 FNDC8Q8TC99 324 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 NSMAFQ92636 917 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 FBXW5Q969U6 566 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 FBXO17Q96EF6 278 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 ZNF570Q96NI8 536 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 RBP7Q96R05 134 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 FEVQ99581 238 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 TRAF4Q9BUZ4 470 aaPredicted RBP10.36□□□□□ -0.75
CLN8-207ENST00000524258 MOV10Q9HCE1 1003 aaKnown RBP10.36□□□□□ -0.75
CLN8-207ENST00000524258 KRCC1Q9NPI7 259 aaPredicted RBP10.36□□□□□ -0.75
CLN8-207ENST00000524258 ARMC1Q9NVT9 282 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 GRHPRQ9UBQ7 328 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 DNAJB9Q9UBS3 223 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 CDH10Q9Y6N8 788 aa10.36□□□□□ -0.75
CLN8-207ENST00000524258 FLNAP21333 2647 aaKnown RBP10.35□□□□□ -0.75
CLN8-207ENST00000524258 IGLV1-36A0A0B4J1U3 117 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 SOCS2O14508 198 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 IDH3BO43837 385 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 TMCC2O75069 709 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 UBL3O95164 117 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 STAMBPO95630 424 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 SERPINA5P05154 406 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 CD79AP11912 226 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 HIST1H1CP16403 213 aaKnown RBP10.35□□□□□ -0.75
CLN8-207ENST00000524258 SLC6A6P31641 620 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 TTKP33981 857 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 ZNF84P51523 738 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 ART1P52961 327 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 RAB39AQ14964 217 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 SLC22A25Q6T423 547 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 UGT2A3Q6UWM9 527 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 ADCK1Q86TW2 530 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 NPEPL1Q8NDH3 523 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 OR10G2Q8NGC3 310 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 OR4Q3Q8NH05 313 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 GIPC3Q8TF64 312 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 PIGTQ969N2 578 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 TSSK2Q96PF2 358 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 ERMAPQ96PL5 475 aaPredicted RBP10.35□□□□□ -0.75
CLN8-207ENST00000524258 SNX18Q96RF0 628 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 DHRS9Q9BPW9 319 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 GSX2Q9BZM3 304 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 NUAK2Q9H093 628 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 SYT4Q9H2B2 425 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 POLE4Q9NR33 117 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 ITGB1BP2Q9UKP3 347 aa10.35□□□□□ -0.75
CLN8-207ENST00000524258 OR6C68A6NDL8 312 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 TIPRLO75663 272 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 CST2P09228 141 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 NR2C1P13056 603 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 NPR2P20594 1047 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 PRKACGP22612 351 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 LAP3P28838 519 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 RPS6KA3P51812 740 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 KCNMB1Q16558 191 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 SWI5Q1ZZU3 235 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 ZNF544Q6NX49 715 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 CCDC121Q6ZUS5 278 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 DPPA2Q7Z7J5 298 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 ZBTB46Q86UZ6 589 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 OR6V1Q8N148 313 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 LRRC75A-AS1Q8N1F1 130 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 LNX2Q8N448 690 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 PAQR4Q8N4S7 273 aaPredicted RBP10.34□□□□□ -0.75
CLN8-207ENST00000524258 CPEB3Q8NE35 698 aaKnown RBP10.34□□□□□ -0.75
CLN8-207ENST00000524258 NUP37Q8NFH4 326 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 ZNRF4Q8WWF5 429 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 GTPBP3Q969Y2 492 aaKnown RBP10.34□□□□□ -0.75
CLN8-207ENST00000524258 NMNAT3Q96T66 252 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 CCL19Q99731 98 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 WNT5BQ9H1J7 359 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 EDARQ9UNE0 448 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 LAMP3Q9UQV4 416 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 ZANQ9Y493 2812 aa10.34□□□□□ -0.75
CLN8-207ENST00000524258 ARFGEF3Q5TH69 2177 aa10.33□□□□□ -0.76
CLN8-207ENST00000524258 TMEM129A0AVI4 362 aa10.33□□□□□ -0.76
CLN8-207ENST00000524258 XKRYO14609 159 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms