RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 FOXL2NBQ6ZUU3 175 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 TIGD4Q8IY51 512 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 GPR137CQ8N3F9 429 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 SVOPQ8N4V2 548 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 C9orf106Q8NAJ2 232 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 OR51G2Q8NGK0 314 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 CPT1CQ8TCG5 803 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 ZNRF4Q8WWF5 429 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 SGCDQ92629 289 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 MCHR2Q969V1 340 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 ZMYND19Q96E35 227 aaPredicted RBP11.55□□□□□ -0.56
CPNE3-205ENST00000522240 TMEM80Q96HE8 168 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 MNTQ99583 582 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 CDCA4Q9BXL8 241 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 ADGRL4Q9HBW9 690 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 SRA1Q9HD15 236 aaKnown RBP11.55□□□□□ -0.56
CPNE3-205ENST00000522240 INPP5EQ9NRR6 644 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 SCOCQ9UIL1 159 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 CLEC4AQ9UMR7 237 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 EXOSC1Q9Y3B2 195 aaKnown RBP11.55□□□□□ -0.56
CPNE3-205ENST00000522240 EMC9Q9Y3B6 208 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 FAM215AQ9Y5M1 114 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 FLNCQ14315 2725 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 IGKV1D-43A0A0B4J1Z2 117 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 DHHO43323 396 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 STSP08842 583 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 QDPRP09417 244 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 TIMP3P35625 211 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 ATP6V1E1P36543 226 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 ZNF84P51523 738 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 MVKQ03426 396 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 RTL6Q6ICC9 239 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 FAM214BQ7L5A3 538 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 SLC16A9Q7RTY1 509 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 GLB1L2Q8IW92 636 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 SLC26A10Q8NG04 563 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 OR51L1Q8NGJ5 315 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 OR6K3Q8NGY3 331 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 APH1AQ96BI3 265 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 ZNF775Q96BV0 537 aaPredicted RBP11.54□□□□□ -0.56
CPNE3-205ENST00000522240 INTS14Q96SY0 518 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 YIPF3Q9GZM5 350 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 ERVK-18Q9QC07 812 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 KCNG2Q9UJ96 466 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 COA3Q9Y2R0 106 aaPredicted RBP11.54□□□□□ -0.56
CPNE3-205ENST00000522240 COMMD3-BMI1R4GMX3 469 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 ARHGAP21Q5T5U3 1957 aa11.54□□□□□ -0.56
CPNE3-205ENST00000522240 RPL36A-HNRNPH2H7BZ11 118 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 TFP02787 698 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 MYL12AP19105 171 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 LAP3P28838 519 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 OR3A2P47893 321 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 HSF2Q03933 536 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 IRF3Q14653 427 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 ETFDHQ16134 617 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 PHYHD1Q5SRE7 291 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 TSPO2Q5TGU0 170 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 LRFN4Q6PJG9 635 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 B3GLCTQ6Y288 498 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 SHFQ7M4L6 423 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 NUFIP2Q7Z417 695 aaKnown RBP11.53□□□□□ -0.56
CPNE3-205ENST00000522240 ABHD12BQ7Z5M8 362 aaPredicted RBP11.53□□□□□ -0.56
CPNE3-205ENST00000522240 DOLPP1Q86YN1 238 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 SLC35F2Q8IXU6 374 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 SPARTQ8N0X7 666 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 ACBD7Q8N6N7 88 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 OR4F15Q8NGB8 312 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 FCGR1BQ92637 280 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 ALKBH3Q96Q83 286 aaPredicted RBP11.53□□□□□ -0.56
CPNE3-205ENST00000522240 CCDC90BQ9GZT6 254 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 RERGLQ9H628 205 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 VCX3AQ9NNX9 186 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 MRPL22Q9NWU5 206 aaKnown RBP11.53□□□□□ -0.56
CPNE3-205ENST00000522240 MALT1Q9UDY8 824 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 UGT2A1Q9Y4X1 527 aa11.53□□□□□ -0.56
CPNE3-205ENST00000522240 SPENQ96T58 3664 aaKnown RBP11.53□□□□□ -0.56
CPNE3-205ENST00000522240 TMEM129A0AVI4 362 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 C12orf71A8MTZ7 269 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 FAM171A2A8MVW0 826 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 SELENOFO60613 162 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 UPK3AO75631 287 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 APOL3O95236 402 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 CNOT4O95628 575 aaKnown RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 CLPTM1O96005 669 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 HLA-DQA2P01906 255 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 MRPL3P09001 348 aaKnown RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 OR2T7P0C7T2 308 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 C21orf33P30042 268 aaPredicted RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 CEACAM8P31997 349 aaPredicted RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 NAA10P41227 235 aaPredicted RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 ENTPD1P49961 510 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 PER3P56645 1201 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 MRPS34P82930 218 aaKnown RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 PIGFQ07326 219 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 DBPQ10586 325 aaPredicted RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 NFATC3Q12968 1075 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 KCNMB1Q16558 191 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 PCK2Q16822 640 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms