RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 DDAH2O95865 285 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 IFNA4P05014 189 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 ANXA7P20073 488 aaKnown RBP12.64□□□□□ -0.39
SYNPO-205ENST00000522122 TPMTP51580 245 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 PRAMEF20Q5VT98 475 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 ZNF775Q96BV0 537 aaPredicted RBP12.64□□□□□ -0.39
SYNPO-205ENST00000522122 GPR137BO60478 399 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 CXCL10P02778 98 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 CD1CP29017 333 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 RPL27P61353 136 aaKnown RBP12.64□□□□□ -0.39
SYNPO-205ENST00000522122 RPS18P62269 152 aaKnown RBP12.64□□□□□ -0.39
SYNPO-205ENST00000522122 SLC35A1P78382 337 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 GRINAQ7Z429 371 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 DCXRQ7Z4W1 244 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 COMTD1Q86VU5 262 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 BARHL1Q9BZE3 327 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 C1orf123Q9NWV4 160 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 RLFQ13129 1914 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 PRAMEF27A3QJZ7 478 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 HTR5AP47898 357 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 P2RX3P56373 397 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 FOXK1P85037 733 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 ZNF674Q2M3X9 581 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 YOD1Q5VVQ6 348 aaPredicted RBP12.64□□□□□ -0.39
SYNPO-205ENST00000522122 PRAMEF9Q5VWM5 478 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 PXT1Q8NFP0 134 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 PPP1R35Q8TAP8 253 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 CGGBP1Q9UFW8 167 aaPredicted RBP12.64□□□□□ -0.39
SYNPO-205ENST00000522122 EXOGQ9Y2C4 368 aaKnown RBP12.64□□□□□ -0.39
SYNPO-205ENST00000522122 TTLL8A6PVC2 850 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 STK17BO94768 372 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 GABRB1P18505 474 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 CPT2P23786 658 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 PCBP4P57723 403 aaKnown RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 FGL2Q14314 439 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 SYT9Q86SS6 491 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 RNF141Q8WVD5 230 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 SLAMF9Q96A28 289 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 DHRS9Q9BPW9 319 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 COA3Q9Y2R0 106 aaPredicted RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 WIF1Q9Y5W5 379 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 CD63P08962 238 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 AFF3P51826 1226 aaKnown RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 GABREP78334 506 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 ZBTB37Q5TC79 503 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 FBXW12Q6X9E4 464 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 ZC3HAV1LQ96H79 300 aaKnown RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 CNTNAP3Q9BZ76 1288 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 NMNAT2Q9BZQ4 307 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 FAM212BQ9NTI7 297 aaPredicted RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 KIF25Q9UIL4 384 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 PDCD11Q14690 1871 aaKnown RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 TRAPPC2LH3BP13 241 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 CHRM2P08172 466 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 GIPP09681 153 aaPredicted RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 CHATP28329 748 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 CCR2P41597 374 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 DCDP81605 110 aaKnown RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 ELAVL1Q15717 326 aaKnown RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 NPSR1Q6W5P4 371 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 H1FNTQ75WM6 255 aaPredicted RBP12.63□□□□□ -0.39
SYNPO-205ENST00000522122 KDM8Q8N371 416 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 ANKRD53Q8N9V6 530 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 SCARB1Q8WTV0 552 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 SMIM19Q96E16 107 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 NINQ8N4C6 2090 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 A6NCN8 305 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 MSX1P28360 303 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 RFX2P48378 723 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 SLC25A30Q5SVS4 291 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 PARM1Q6UWI2 310 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 PGAP1Q75T13 922 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 ANGPTL5Q86XS5 388 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 DUSP18Q8NEJ0 188 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 PATE1Q8WXA2 126 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 MIXL1Q9H2W2 232 aa12.63□□□□□ -0.39
SYNPO-205ENST00000522122 A0A087WV62 115 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 AIPO00170 330 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 SDHAP31040 664 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 MFGE8Q08431 387 aaPredicted RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 CDK5R1Q15078 307 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 ZNF79Q15937 498 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 ARSGQ96EG1 525 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 SLC6A18Q96N87 628 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 BRCA1P38398 1863 aaKnown RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 WDR81Q562E7 1941 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 MAGEB4O15481 346 aaPredicted RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 FOSL2P15408 326 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 PPT1P50897 306 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 OR10A3P58181 314 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 AAED1Q7RTV5 226 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 FBXL6Q8N531 539 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 OR4D6Q8NGJ1 314 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 BAHD1Q8TBE0 780 aaPredicted RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 RHBDD1Q8TEB9 315 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms