RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 SRPXP78539 464 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 TMEM52BQ4KMG9 183 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SAPCD1Q5SSQ6 148 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 TECPR1Q7Z6L1 1165 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 CXXC1Q9P0U4 656 aaPredicted RBP11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SLAMF8Q9P0V8 285 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 LRP5O75197 1615 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 XKRY2A2RUG3 117 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 H0YGG7 62 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 CNIH1O95406 144 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 ZNF728P0DKX0 622 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 EDN3P14138 238 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 MEOX1P50221 254 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 OR8B8Q15620 311 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 OR8U1Q8NH10 309 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 PIGCQ92535 297 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 SCMH1Q96GD3 660 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 EGLN3Q9H6Z9 239 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 UBQLN4Q9NRR5 601 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 ARL2-SNX15V9GYD0 113 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 LGALS8O00214 317 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 ABLIM3O94929 683 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 RFC3P40938 356 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 LINC01465Q8N7H1 131 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 OR14A16Q8NHC5 309 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 REEP6Q96HR9 211 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 MCOLN1Q9GZU1 580 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 R3HDMLQ9H3Y0 253 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 GNG12Q9UBI6 72 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 TSPAN12O95859 305 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 PSMB1P20618 241 aaKnown RBP11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 BIDP55957 195 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 MLLT11Q13015 90 aaPredicted RBP11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 SLC5A12Q1EHB4 618 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 H1FXQ92522 213 aaKnown RBP11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 KCTD12Q96CX2 325 aaKnown RBP11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 MYH7BA7E2Y1 1941 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 CLDN1O95832 211 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 EGFP01133 1207 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 CST2P09228 141 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 FPR3P25089 353 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 P2RY14Q15391 338 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 LPCAT3Q6P1A2 487 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 PRICKLE2Q7Z3G6 844 aa11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 BRIX1Q8TDN6 353 aaKnown RBP11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 NOL4LQ96MY1 436 aaPredicted RBP11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 TMEM184BQ9Y519 407 aaPredicted RBP11.17□□□□□ -0.62
ERGIC1-208ENST00000520399 TRBV4-1A0A0J9YWV2 114 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 SUSD5O60279 629 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 CIDEAO60543 219 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 AMTP48728 403 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 ZNF684Q5T5D7 378 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 VRK3Q8IV63 474 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 LAX1Q8IWV1 398 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 GOT1L1Q8NHS2 421 aaPredicted RBP11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 AKR1E2Q96JD6 320 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 OPALINQ96PE5 141 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 CHRNA9Q9UGM1 479 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 SLC23A1Q9UHI7 598 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 LRRC30A6NM36 301 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 AADACP22760 399 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 CCR6P51684 374 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 UBE2IP63279 158 aaKnown RBP11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 ZP2Q05996 745 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 SEMA3BQ13214 749 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 ERV3-1Q14264 604 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 RNF113BQ8IZP6 322 aaKnown RBP11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 KIAA1958Q8N8K9 716 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 LFNGQ8NES3 379 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 OR1S2Q8NGQ3 325 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 ZNF582Q96NG8 517 aaPredicted RBP11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 ADOQ96SZ5 270 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 NPAS1Q99742 590 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 GFRA2O00451 464 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 TAPBPO15533 448 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 LPAL2Q16609 132 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 SLCO4C1Q6ZQN7 724 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 ASB17Q8WXJ9 295 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 TMEM43Q9BTV4 400 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 SRRQ9GZT4 340 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 EPHX3Q9H6B9 360 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 BARX1Q9HBU1 254 aaPredicted RBP11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 GASTP01350 101 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 HOXB5P09067 269 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 SMIM17P0DL12 118 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 AREGP15514 252 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 MRPL2Q5T653 305 aaKnown RBP11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 HSD17B13Q7Z5P4 300 aaPredicted RBP11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 OR4M1Q8NGD0 313 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 CHAC2Q8WUX2 184 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 ISL2Q96A47 359 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 A4GALTQ9NPC4 353 aa11.16□□□□□ -0.62
ERGIC1-208ENST00000520399 MCRIP1C9JLW8 97 aa11.15□□□□□ -0.62
ERGIC1-208ENST00000520399 FURINP09958 794 aa11.15□□□□□ -0.62
ERGIC1-208ENST00000520399 SPP1P10451 314 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms