RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SF3A3Q12874 501 aaKnown RBP eCLIP10.62□□□□□ -0.71
CSMD1-205ENST00000519623 NKPD1Q17RQ9 610 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 TBC1D28Q2M2D7 210 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 PABPC1L2AQ5JQF8 200 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 LIPNQ5VXI9 398 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 HDDC2Q7Z4H3 204 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 RFLNBQ8N5W9 214 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 BCL2L14Q9BZR8 327 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 LRMDAQ9H2I8 198 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 TXNIPQ9H3M7 391 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 NARFLQ9H6Q4 476 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 SMURF2Q9HAU4 748 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 MRGBPQ9NV56 204 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 FGFR1OP2Q9NVK5 253 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 SLCO1C1Q9NYB5 712 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 NKIRAS2Q9NYR9 191 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 GPR160Q9UJ42 338 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 A4GNTQ9UNA3 340 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 HIF3AQ9Y2N7 669 aa10.62□□□□□ -0.71
CSMD1-205ENST00000519623 LOC100509620A0A075B734 347 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 HTR3EA5X5Y0 456 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 FAM220BPB1ANY3 271 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 PPIHO43447 177 aaKnown RBP10.61□□□□□ -0.71
CSMD1-205ENST00000519623 PIP5K1CO60331 668 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 CDC14BO60729 498 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 IGHV3-13P01766 116 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 TFP02787 698 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 TROVE2P10155 538 aaKnown RBP eCLIP10.61□□□□□ -0.71
CSMD1-205ENST00000519623 GAAP10253 952 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 STOMP27105 288 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 SRP14P37108 136 aaKnown RBP10.61□□□□□ -0.71
CSMD1-205ENST00000519623 CRYBB2P43320 205 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 FMODQ06828 376 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 FHL1Q13642 323 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 SGCAQ16586 387 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 FAM27BQ5VT28 67 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 TMEM154Q6P9G4 183 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 GLCCI1Q86VQ1 547 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 LRRC75AQ8NAA5 344 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 GTF3AQ92664 365 aaKnown RBP10.61□□□□□ -0.71
CSMD1-205ENST00000519623 TMEM186Q96B77 213 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 BPIFA2Q96DR5 249 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 POM121L2Q96KW2 1035 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 ZNF416Q9BWM5 594 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 ARGLU1Q9NWB6 273 aaPredicted RBP10.61□□□□□ -0.71
CSMD1-205ENST00000519623 HIF1ANQ9NWT6 349 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 GID8Q9NWU2 228 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 STX18Q9P2W9 335 aaKnown RBP10.61□□□□□ -0.71
CSMD1-205ENST00000519623 SNX13Q9Y5W8 968 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 WNK2Q9Y3S1 2297 aa10.61□□□□□ -0.71
CSMD1-205ENST00000519623 ELOVL7A1L3X0 281 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 FFAR1O14842 300 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 TCF21O43680 179 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 IFI30P13284 250 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 ZNF32P17041 273 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 MAKP20794 623 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 PCMT1P22061 227 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 APLNRP35414 380 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 WNT5AP41221 380 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 RPL27P61353 136 aaKnown RBP10.6□□□□□ -0.71
CSMD1-205ENST00000519623 PSG4Q00888 419 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 HSF2Q03933 536 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 ST3GAL3Q11203 375 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 TAF11Q15544 211 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 MAPRE2Q15555 327 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 MOGQ16653 247 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 PCGF3Q3KNV8 242 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 LRRC23Q53EV4 343 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-205ENST00000519623 ALG10Q5BKT4 473 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 TMEM255AQ5JRV8 349 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 THEM4Q5T1C6 240 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 RINLQ6ZS11 566 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 MICU2Q8IYU8 434 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 ZNF101Q8IZC7 436 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 CLDN22Q8N7P3 220 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 PCYOX1LQ8NBM8 494 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 OR2T12Q8NG77 320 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 OR1J1Q8NGS3 322 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 NSMAFQ92636 917 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 MARS2Q96GW9 593 aaKnown RBP10.6□□□□□ -0.71
CSMD1-205ENST00000519623 TPD52L3Q96J77 140 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 ALG12Q9BV10 488 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 KCNN2Q9H2S1 579 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 LPAR2Q9HBW0 351 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 MAN2C1Q9NTJ4 1040 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 CMTM6Q9NX76 183 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 GMPR2Q9P2T1 348 aaKnown RBP10.6□□□□□ -0.71
CSMD1-205ENST00000519623 METRNQ9UJH8 293 aa10.6□□□□□ -0.71
CSMD1-205ENST00000519623 C5orf49A4QMS7 147 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 IGHMP01871 453 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 MSMBP08118 114 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 CCNOP22674 350 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 LAP3P28838 519 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 MPV17P39210 176 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 YAP1P46937 504 aaKnown RBP10.59□□□□□ -0.71
CSMD1-205ENST00000519623 MMP15P51511 669 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 CTXN1P60606 82 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 ERVK-25P63136 954 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 PRKCDQ05655 676 aa10.59□□□□□ -0.71
CSMD1-205ENST00000519623 CD47Q08722 323 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms