RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TECTBQ96PL2 329 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 TESK2Q96S53 571 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 TMEM121Q9BTD3 319 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 HINT2Q9BX68 163 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 TRIM4Q9C037 500 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 Q9H3A6 140 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 PDFQ9HBH1 243 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 LYRM4Q9HD34 91 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 MYOZ2Q9NPC6 264 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 BATF3Q9NR55 127 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 MS4A12Q9NXJ0 267 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 AHSPQ9NZD4 102 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 IL17CQ9P0M4 197 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 SPRR3Q9UBC9 169 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 LCMT1Q9UIC8 334 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF229Q9UJW7 825 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 RBMX2Q9Y388 322 aaKnown RBP2.6□□□□□ -1.99
VPS13B-207ENST00000518569 TIMM22Q9Y584 194 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 BRWD3Q6RI45 1802 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 SHPRHQ149N8 1683 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 CAMTA1Q9Y6Y1 1673 aa2.6□□□□□ -1.99
VPS13B-207ENST00000518569 GOLGA3Q08378 1498 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PLA2R1Q13018 1463 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TCOF1Q13428 1488 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 MAGI2Q86UL8 1455 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 RAPGEF2Q9Y4G8 1499 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 CDK13Q14004 1512 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PPIAL4CA0A0B4J2A2 164 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 A0A1B0GVL5 298 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TMEM213A2RRL7 107 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 VPS37CA5D8V6 355 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 DHRS7CA6NNS2 312 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 B4DXG7 233 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 FOXE1O00358 373 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 NDUFS6O75380 124 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PSIP1O75475 530 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SCRG1O75711 98 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 NEBLO76041 1014 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 CIAO1O76071 339 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 F10P00742 488 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 RPN2P04844 631 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 IFNA6P05013 189 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SLC35E2BP0CK96 405 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PPIAL4GP0DN37 164 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 ANXA3P12429 323 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TPSB2P20231 275 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PSMB1P20618 241 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 M6PRP20645 277 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 MMP11P24347 488 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 GTF2E2P29084 291 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 CYLC1P35663 651 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 CRYBB2P43320 205 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 MAGEA6P43360 314 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 GNPDA1P46926 289 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 GYG1P46976 350 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 UQCRFS1P47985 274 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 CSNK1DP48730 415 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TGM4P49221 684 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 ARRB1P49407 418 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SERPINB8P50452 374 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 NOVA1P51513 510 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TPMTP51580 245 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 EFNA3P52797 238 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PLK1P53350 603 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 AP3S2P59780 193 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 UBE2G2P60604 165 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 RPL10AP62906 217 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 RPL8P62917 257 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 RAD51Q06609 339 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PJVKQ0ZLH3 352 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SMARCB1Q12824 385 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 CDC20Q12834 499 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TPSAB1Q15661 275 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 MICBQ29980 383 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 COQ5Q5HYK3 327 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TIGD3Q6B0B8 471 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 FAM71F2Q6NXP2 309 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 C3orf33Q6P1S2 294 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 ULK3Q6PHR2 472 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 CYS1Q717R9 158 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PID1Q7Z2X4 250 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SMIM15Q7Z3B0 74 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SLC51BQ86UW2 128 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 MMAAQ8IVH4 418 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SELENOHQ8IZQ5 122 aaKnown RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF786Q8N393 782 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 CCNYL1Q8N7R7 359 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 FBXO36Q8NEA4 188 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 OR10H4Q8NGA5 316 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 OR4D6Q8NGJ1 314 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 LINC01006Q8NI28 216 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF564Q8TBZ8 553 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PHOSPHO2Q8TCD6 241 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 MARCH1Q8TCQ1 289 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TMEM239Q8WW34 195 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PSMG2Q969U7 264 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 S100PBPQ96BU1 408 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SLC25A38Q96DW6 304 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 ASB9Q96DX5 294 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 AKR1E2Q96JD6 320 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms