RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 FOXJ2Q9P0K8 574 aa23.74■■□□□ 1.39
COL13A1-210ENST00000517713 IGKV1D-43A0A0B4J1Z2 117 aa23.74■■□□□ 1.39
COL13A1-210ENST00000517713 A0A1W2PNU3 283 aaPredicted RBP23.74■■□□□ 1.39
COL13A1-210ENST00000517713 TRIQKQ629K1 86 aa23.74■■□□□ 1.39
COL13A1-210ENST00000517713 KRT77Q7Z794 578 aa23.74■■□□□ 1.39
COL13A1-210ENST00000517713 OR4M1Q8NGD0 313 aa23.74■■□□□ 1.39
COL13A1-210ENST00000517713 RNF128Q8TEB7 428 aa23.74■■□□□ 1.39
COL13A1-210ENST00000517713 SGCZQ96LD1 299 aa23.74■■□□□ 1.39
COL13A1-210ENST00000517713 C4orf45Q96LM5 186 aa23.74■■□□□ 1.39
COL13A1-210ENST00000517713 SLC25A18Q9H1K4 315 aa23.74■■□□□ 1.39
COL13A1-210ENST00000517713 CFAP54Q96N23 3096 aa23.73■■□□□ 1.39
COL13A1-210ENST00000517713 CCDC187A0A096LP49 1063 aa23.73■■□□□ 1.39
COL13A1-210ENST00000517713 HLA-DQB1P01920 261 aa23.73■■□□□ 1.39
COL13A1-210ENST00000517713 SPATC1Q76KD6 591 aa23.73■■□□□ 1.39
COL13A1-210ENST00000517713 KLHL13Q9P2N7 655 aa23.73■■□□□ 1.39
COL13A1-210ENST00000517713 A0A0G2JMP0 313 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 A0A0X1KG70 313 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 SNRPBP14678 240 aaKnown RBP23.72■■□□□ 1.39
COL13A1-210ENST00000517713 RBMS1P29558 406 aaKnown RBP23.72■■□□□ 1.39
COL13A1-210ENST00000517713 KIR3DL2P43630 455 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 TMEM164Q5U3C3 297 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 TIGD3Q6B0B8 471 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 TMEM225Q6GV28 225 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 MDGA2Q7Z553 956 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 GPAT4Q86UL3 456 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 C19orf18Q8NEA5 215 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 OR4M2Q8NGB6 313 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 OR5H6Q8NGV6 325 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 RBP7Q96R05 134 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 SLC22A4Q9H015 551 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.72■■□□□ 1.39
COL13A1-210ENST00000517713 BRD7Q9NPI1 651 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 P4HTMQ9NXG6 502 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 DKKL1Q9UK85 242 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 NCOR1O75376 2440 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 SULT2B1O00204 365 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 ZNF254O75437 659 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 SOX2P48431 317 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 SLC35A1P78382 337 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 ZNF239Q16600 458 aaKnown RBP23.72■■□□□ 1.39
COL13A1-210ENST00000517713 WDR38Q5JTN6 314 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 TEX30Q5JUR7 227 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 H3F3CQ6NXT2 135 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 CELF2-AS1Q8N7Q2 184 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 OR52N5Q8NH56 324 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 MIB2Q96AX9 1013 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 TMEM41AQ96HV5 264 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 OXGR1Q96P68 337 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 NEDD4LQ96PU5 975 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 GFI1Q99684 422 aa23.72■■□□□ 1.39
COL13A1-210ENST00000517713 MRPL13Q9BYD1 178 aaKnown RBP23.72■■□□□ 1.39
COL13A1-210ENST00000517713 A0A0B4J203 849 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 ANKRD61A6NGH8 418 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 ZNF814B7Z6K7 855 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 CCR9P51686 369 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 B3GNTL1Q67FW5 361 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-210ENST00000517713 TMPPEQ6ZT21 453 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 RDH10Q8IZV5 341 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 ESX1Q8N693 406 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 GPR148Q8TDV2 347 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 C11orf54Q9H0W9 315 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-210ENST00000517713 SLITRK2Q9H156 845 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 SACM1LQ9NTJ5 587 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 ANKRD10Q9NXR5 420 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 KLHL9Q9P2J3 617 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 TRABD2BA6NFA1 517 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 PLA2G10O15496 165 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 ZIC3O60481 467 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 RIDAP52758 137 aaKnown RBP23.71■■□□□ 1.39
COL13A1-210ENST00000517713 EIF3IQ13347 325 aaKnown RBP23.71■■□□□ 1.39
COL13A1-210ENST00000517713 PCK2Q16822 640 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 ODF4Q2M2E3 257 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 RAET1LQ5VY80 246 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 KCNJ15Q99712 375 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 TCF7L1Q9HCS4 588 aa23.71■■□□□ 1.39
COL13A1-210ENST00000517713 AQP7P3A6NL99 342 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 GALR2O43603 387 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-210ENST00000517713 TRAF3IP2O43734 574 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-210ENST00000517713 CBR3O75828 277 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 AQP8O94778 261 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 SERPINA7P05543 415 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 PITPNBP48739 271 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 THEM4Q5T1C6 240 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 OR7E24Q6IFN5 339 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 GLB1L2Q8IW92 636 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 ZNF433Q8N7K0 673 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-210ENST00000517713 DTX3Q8N9I9 347 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 SPATA2Q9UM82 520 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 LRP12Q9Y561 859 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 KMT2EQ8IZD2 1858 aa23.7■■□□□ 1.38
COL13A1-210ENST00000517713 A0A1B0GVC2 190 aa23.69■■□□□ 1.38
COL13A1-210ENST00000517713 A6NIN4 97 aa23.69■■□□□ 1.38
COL13A1-210ENST00000517713 GPR171O14626 319 aa23.69■■□□□ 1.38
COL13A1-210ENST00000517713 PMS2P2O95744 297 aa23.69■■□□□ 1.38
COL13A1-210ENST00000517713 WNT11O96014 354 aa23.69■■□□□ 1.38
COL13A1-210ENST00000517713 HRGP04196 525 aa23.69■■□□□ 1.38
COL13A1-210ENST00000517713 P04436 131 aa23.69■■□□□ 1.38
COL13A1-210ENST00000517713 CLRN1P58418 232 aa23.69■■□□□ 1.38
COL13A1-210ENST00000517713 DHRS13Q6UX07 377 aa23.69■■□□□ 1.38
COL13A1-210ENST00000517713 STAC2Q6ZMT1 411 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms